Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_2217 |
Symbol | |
ID | 3740581 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 2508676 |
End bp | 2509452 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637779509 |
Product | Short-chain dehydrogenase/reductase SDR |
Protein accession | YP_385169 |
Protein GI | 78223422 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.0140674 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAAGAG TCGAGGGAAA GGTAGCAATT GTCACTGGTG CAGCATCTGG CTTAGGGGCT GCCAGTGCAC GGCTTCTTGC GCGCGAGGGA GCAAGGGTCG TAATTACGGA TATCAATGTA AAAGATGGTC AGGCGTTGGC TAATTCACTA GGTGAAGGAG CGATCTTTCT GCGGCATGAT GTCAGTGACG AGGCGCAGTG GGTTGCCATT ATCGAGCAGA CGTTGTCACG CTTCGGACGC CTGGACATCT TGGTTAATAA CGCGGGTGTG GTGGTTGTGG CTGATGTTGA ACACACGACA GTGGAAGATT GGCGTTTTGT CAATGCCGTC GGCACGGACG GTACATTCTT CGGTTGCAAG CATGCCATAC CAGCAATGCG AAGATCGGGG GGAGGATCTA TCGTCAATCT GTCATCCCTT GCCGGCATCG GCGGCTATCC CCTTGTGTTT GCCTATTCCG CTTCCAAGGG GGCGATTCGT GCCATGACCA AATCCGTTGC TGTCCATTGT GCCCAGAATA AATACAATAT CCGGTGCAAC TCCATTCATC CGGGGGGGAT CCTCACCCCC TTGGTTGAAG GATTTATCAA GTCGGCGGTT GGTACTGCGG ATGCAAGTAT GGACAAAGCA CGGGACCTGT TTTCCAAGTT GGGTGAGCCT GATGATGTTG CCTACATGGT CTTGTACCTG GCGTCGGACG AGTCTAAGTT TGTGAGCGGC TCCGAGTTCA TCATTGATAA CACGGCAACA ATTACCGAGG GAGTAGTGCC GACGTAG
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Protein sequence | MGRVEGKVAI VTGAASGLGA ASARLLAREG ARVVITDINV KDGQALANSL GEGAIFLRHD VSDEAQWVAI IEQTLSRFGR LDILVNNAGV VVVADVEHTT VEDWRFVNAV GTDGTFFGCK HAIPAMRRSG GGSIVNLSSL AGIGGYPLVF AYSASKGAIR AMTKSVAVHC AQNKYNIRCN SIHPGGILTP LVEGFIKSAV GTADASMDKA RDLFSKLGEP DDVAYMVLYL ASDESKFVSG SEFIIDNTAT ITEGVVPT
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