| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2178 |
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| Symbol | |
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| ID | 3739970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 2461256 |
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| End bp | 2463907 |
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| Gene Length | 2652 bp |
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| Protein Length | 883 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637779472 |
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| Product | Integrins alpha chain |
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| Protein accession | YP_385132 |
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| Protein GI | 78223385 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1621] Beta-fructosidases (levanase/invertase) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.297382 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.000212806 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACAAAAA CTCTTGCGAC TTTACTTGCC AGTACGTTGT TAACCCTAAT TAGCGTTACA
CTTGTGACTT CGATTGCATC TGCAATCATG ATTCCCAAAA TCGTTGACTA TGACGGTGAT
GGTAAGACCG ATGTAGCCAT GTTTCGTCCA TCAGAGGGCA AATGGTACAT TTTGTACAGT
TCAAATAACA CACAGCATGT TGTGAATTAC GGAATCAGTG GTGATATTCC AGTTTTTGGC
GATTTTGACG GCGACGGCAA AACCGACGAA GCTGTATACC GGCCATCAGA AGGAAGGTGG
TACATCTTGA GGAGTTCTAA TGGCTCTCAA AATGTTATTA ACTATGGAAT TAGTGGCGAT
ATCGCAGTTC CCGGCGACTA TGACGGAGAT GGTAAGACCG ATGTAGCCAT GTTTCGTCCA
TCAGAGGGCA ACTGGTACCT TTTATACAGT TCAAATAACA CACAGCATGT TGTGAATTAC
GGAATTAGCG GTGATATTCC TGTTTTTGGC GATTTTGACG GCGACGGCAA AACCGACGAA
GCTGTATACC GGCCATCAGA AGGCAAGTGG TACATCTTGA GCAGCTCTAA CGGCTCTCAA
AATGTCATTA GCTATGGAAT TAGTGGCGAT ATCGCAGTAC CCGGCGACTA TGACGGTGAT
GGTAAGACTG ATGTAGCCAT GTTCCGTCCA TCAGAGGGCA ACTGGTATAT TTTGTACAGT
TCAAATAACA CACAGCATGT TGTGAATTAC GGAATCGGTA GCGACATTCC GGCTCCCGGC
GACTACGACG GCGACGGCAA GACTGACGAA GCTGTATACC GGCCGTCGGC AGGGAAATGG
TACATCCTAA ACAGCTCCAA TGGCTCGCCA CAAGTTGTAT CGTACGGCTT ACCGACGGAC
ATGCCTTTAG TGAATCTGTT TCAACATTTT TCATCCGGTT ATTCTGTGGT ACGGCAAATA
ACAATTAATG GAGGGCTCTC CGGCATAGCC GCGGGGGCTG TTGCATCACT CACGATTGAC
TCTAGGGCAC TAATCTCTGA GGGGCTGTTG CGGTCCGACC GTAACGACTT GCGACTTTTC
TATGACAACC AGGAGATAGA TAGAGCTCTG GCTGATACCG GGACCATTCA TTTCAAGGTA
CAGGTAGCGA TTGCGGCAAA TGGCGCAGAC AGTGGGTATT GTCTCTACTA TGGCAATCCG
AACGAATCTG TCTCTCCAAA GTCGAACAGA GAGAACATTT ATCCTTTCTA TGTTGACGGC
AGTTCAACGG CCGCATTCGT TGTTACCGGT CCGACTCCGA CCATCATGGC GATGCCGAAG
CCAGAATTCC TGAAGTTCAG AAACAACCCT TTGTTGAGCC GTACCCCAGG TTATTACGAC
TGGAAAAATG TGCGTGATAT CAATTCACTC CTATACGAAG ATGGATGGTA TTACGCCTAT
TACGATTGTG ACGATGAGGG AACTCTTGAC GGGTTCCAAG GATGGGGTGT CTGTCAGGCA
AAAAGCCAAG ATTTGTCCAA CTGGTTAAAG CTGGGACCGA TCTTGCAGCC TAGCCTAGAG
GAGGATTCGG GATCAGCTAG TGGCGCATAT GTAACGAAAA TTGGTTCAAC ATTTTATATG
TACTACCTGG GTACTCCCAA CATTGTCTTG GGTGTACCTC TTACTCCGTA TAATGGAATG
TTAGCAACTG CTTCTGCGAT AACAGGACCG TATACCAAGA AAGGAGTGGT TCTACCTCTG
AGGAAAGGGG AATTTGACCA AGACGAGGCA TTGATCAATA CCGTTTGGTA CGACGGCACC
AAGTATAATT GTCTGTACTC AGCCGCGGCC TTGGGATATG CAAACGCTCT TGACCCGTCT
GGCCCCTGGG ATCATAGGAC TAGCGTTATT GATGGGCGAG AAGGTATTGA GAATCCCGTG
CTGATTCATG ACGCGTTGTC TGGGTATTAT TACTTGTTTG CAAACCATGT GCAGCAACCG
AATTCAGAGC CAGCATATAC AGATTCTATT GTCATGTACT GGTCTAACGA CCCGAAATCT
TGGGACGTAT CAAATAAGAC TACGGTCGTT TCTCCGGGGT ACGGTGCCTG GGATGGCTAC
ATAATCGGGT TGCTTTCGAG TCTGGTCGTG AGAAATGGGG TTGTATACGG AGCTTATGAC
GGTAGGCAGC GGCCACCTTC CGGTGAACCT GTCTGGGGGC ATGAATTTCG TGATGGGGGG
TTCGTGGAGG CAAAATGGCC ATTTTCATGG GGTAGCCGGA TGAAAGTGGC GAGCGGTACG
TCGCTACGAT CAGGCCAAAA GTTTGGCGAT GGTACACTAC GGATCACTGC GCAGATGACC
GGAGGCAACA CCCCTAAGGT AGGACTCTCC GATGGGACCA CTCACTTGTT TTTCCAAGTG
GACAGCAGCA ACATATTTAC AGTGAACAAC AACGGTACCA TGATTGCCGG AGGATTCCAA
CGTGTGAAGG AACTGACAAA AACTTTCGAA ATTCGCCGGT CGGGAACTAA TGTGAGCTAT
ATTTTTGATG GGGTGTTGGT TGCAAGCACA ACTGGCCCAA CGGGAGATCT GCCAATCTCT
ATTGCGGGAG ATGTATTTTT GGAATCTATC ACCTTTGAAC CTGCCGCGCT CGTAACAGCT
GTTATCAGAT AA
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| Protein sequence | MTKTLATLLA STLLTLISVT LVTSIASAIM IPKIVDYDGD GKTDVAMFRP SEGKWYILYS
SNNTQHVVNY GISGDIPVFG DFDGDGKTDE AVYRPSEGRW YILRSSNGSQ NVINYGISGD
IAVPGDYDGD GKTDVAMFRP SEGNWYLLYS SNNTQHVVNY GISGDIPVFG DFDGDGKTDE
AVYRPSEGKW YILSSSNGSQ NVISYGISGD IAVPGDYDGD GKTDVAMFRP SEGNWYILYS
SNNTQHVVNY GIGSDIPAPG DYDGDGKTDE AVYRPSAGKW YILNSSNGSP QVVSYGLPTD
MPLVNLFQHF SSGYSVVRQI TINGGLSGIA AGAVASLTID SRALISEGLL RSDRNDLRLF
YDNQEIDRAL ADTGTIHFKV QVAIAANGAD SGYCLYYGNP NESVSPKSNR ENIYPFYVDG
SSTAAFVVTG PTPTIMAMPK PEFLKFRNNP LLSRTPGYYD WKNVRDINSL LYEDGWYYAY
YDCDDEGTLD GFQGWGVCQA KSQDLSNWLK LGPILQPSLE EDSGSASGAY VTKIGSTFYM
YYLGTPNIVL GVPLTPYNGM LATASAITGP YTKKGVVLPL RKGEFDQDEA LINTVWYDGT
KYNCLYSAAA LGYANALDPS GPWDHRTSVI DGREGIENPV LIHDALSGYY YLFANHVQQP
NSEPAYTDSI VMYWSNDPKS WDVSNKTTVV SPGYGAWDGY IIGLLSSLVV RNGVVYGAYD
GRQRPPSGEP VWGHEFRDGG FVEAKWPFSW GSRMKVASGT SLRSGQKFGD GTLRITAQMT
GGNTPKVGLS DGTTHLFFQV DSSNIFTVNN NGTMIAGGFQ RVKELTKTFE IRRSGTNVSY
IFDGVLVAST TGPTGDLPIS IAGDVFLESI TFEPAALVTA VIR
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