| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2176 |
|---|
| Symbol | |
|---|
| ID | 3739968 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | - |
|---|
| Start bp | 2459110 |
|---|
| End bp | 2460084 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637779470 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_385130 |
|---|
| Protein GI | 78223383 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.0528602 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.0000162414 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGAGTGCCA TGCTGAAACT GTCTGTCGCC ATATGCACCT ACAACGGTGA ACGGTTCCTC
CGGGAGCAGC TGGACAGCAT CGCCCGCCAG ACAAGACTGC CGGACGAGCT GATACTTTGC
GACGACGGTT CTTCGGACAG GACACTGCAG ATCATCGATA ATTTTGCCTC GTCCGCTCCG
TTCGAGGTGA AATCATCCCG GAATGTCAGC AACATCGGTT CAACCAAAAA CTTCGAGCGT
GCCATCGGCC TTTGCGACGG AGACATAATC GCCTTATCGG ATCAAGATGA CGTATGGCAT
CGCGACAAGC TTGAAGTGAT CGAGCGGGCA TTTCTCGATG CGCCGCTGAC GGGAGCGGTT
TTCACAAATG GTGCGGTGGT CGGCGACGAT TTGTCACCCT TGGGGTATAC CCTCTGGGAT
ACCTTCCGCT TCAAGAAGAA GCAACAAAGC TGCTTCAAGA AGGGGAGGGC GCTGGAAGTG
CTTCTGAATC ATGATGTTGT CACGGGCGCG ACCATGGCCT TCCGTTCCGC CTTGCGCGAC
ATCGTTGTCC CGATACCTGT CGAATGGGTC CACGACGCCT GGATAGCACT CTTGACCTCA
ATCTATTCGA AGATTGATTT CATTGACAAG AATCTGATCG ACTATCGCCA GCACAGTAAT
CAGCAGATTG GCAGTGTCAA AAAAAATTTT ACCGACCATA AAAACGTTGC ACAGTCAATA
ACTGATTATT ATGCGCAGAT CTCTAAGTAC GAGATGCTGC TTGATCATAT ACGCTGCTTG
AACCAGGTCC CCAACGATTA TGCCATAGGA AAACTGCACG ATAAGATCGA ACACATGGAA
GTACGTAACA GTATCTGCAC GAGTCCAAAA ATTATCAAGA CCGTAGAAGC CACCTGTGAA
TTGCTGAACC GAAGATACCA TAATTATTCC AACGGATACT TCAGCTTTTG CAAGGATATA
TTTTGGGGCG ATTGA
|
|---|
| Protein sequence | MSAMLKLSVA ICTYNGERFL REQLDSIARQ TRLPDELILC DDGSSDRTLQ IIDNFASSAP
FEVKSSRNVS NIGSTKNFER AIGLCDGDII ALSDQDDVWH RDKLEVIERA FLDAPLTGAV
FTNGAVVGDD LSPLGYTLWD TFRFKKKQQS CFKKGRALEV LLNHDVVTGA TMAFRSALRD
IVVPIPVEWV HDAWIALLTS IYSKIDFIDK NLIDYRQHSN QQIGSVKKNF TDHKNVAQSI
TDYYAQISKY EMLLDHIRCL NQVPNDYAIG KLHDKIEHME VRNSICTSPK IIKTVEATCE
LLNRRYHNYS NGYFSFCKDI FWGD
|
|---|
| |