Gene Gmet_2171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_2171 
Symbol 
ID3739963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp2451547 
End bp2452719 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content61% 
IMG OID637779465 
Productglycosyl transferase, group 1 
Protein accessionYP_385125 
Protein GI78223378 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.178568 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0000236553 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAGTGC TCATGATCTG CAATACCGAC GGCGCGCTCT ATGTGTTCCG CAAACCGATC 
ATCAACAGGC TGGTCGCCTG CGGCCACGAG GTTGATTCCA TCAGCGCGGC CAGCCGGTAC
TTCGAGCCCC TGAACGCACT GGGGGTGCAT CCGCTCCAAC TCGATTTCGC GCGGCATTCG
GTCTCCCCCC TCAGCAACGT GCGGTTGTTC AGGGCACTCT ATGCCATGGT CAGGCGCCTG
AAGCCGGATG TGGTCCACAA TTTCACCCAT AAGCCGGCAA TCCTCGGGTC CATTGCTGCC
CGGCTCGCCG GCGTGAAGGG GATATTCATC ACCATAACGG GACTTGGCTC CCTGTTCGTC
CATGATGATC CCAAGACCCG ATTGATGCGC TATCTCCTCC TCGCCCAGTA CAAATTCGCG
CTCGGTTTCG TGGATACGGT CTTTTTCCAG AATCCGGACG ACATGGAGTA TTTCGTATCG
AAAAAGCTCG TGGGGGCTGG AAAAGCCGTG TTGACCTACG GCTCGGGGCT GGACCTCGAC
GAATACCGGC TCCCGTCCAC GGAAGAAATC GCGCGGGCCA GGGCAATGCT GGGTGCTGAG
CTGGGAGTCG ACCTGCGCGG CCGCAAGGTG GCGCTCTTTC CCGCCCGGGG GGTACCGGAA
AAGGGGTTCT TCGAATTTTA CCGGGCGGCA AAGACCATCA ACGCCCTGGA GCCGGACGCC
TATGCATTCC TGCACCTGGG GCTCGTCGAT GCCGACGCCG CCCGAAGGAT CAGCAAGGAG
GGGATGGAGC AGTATGCCGC TGACTGCGGC GTCAAGTACC TGGGGTTCAA GGACAATATC
AAGGACTACA TGATTGCCTC CGATATCGTG GTCCTCCCGT CGTCCTACCG GGAAGGGACG
CCCCGTTCCC TGATCGAGGC CCTGGCGCTC GGCAAGGCGA TAGTGACCAC CGACATGCCC
GGGTGCAGGG AAACGGTGAT AGATGGGTGG AATGGTTACC TGTGCAGGAA AGGGGACGAA
CAGTCCCTCG TGGCAAAGCT TCTGGCAGTG GATGGGGAGA TGCTGACCGC CGCCAGGAGC
CGGTCGCGCA GATACTGTGA GACGAAGTAT GACGCAGCGT GGCTGGCCGA CCTGACGCTC
GGCCGCTACC AGGGGAGCCT GAACAGTGAA TGA
 
Protein sequence
MKVLMICNTD GALYVFRKPI INRLVACGHE VDSISAASRY FEPLNALGVH PLQLDFARHS 
VSPLSNVRLF RALYAMVRRL KPDVVHNFTH KPAILGSIAA RLAGVKGIFI TITGLGSLFV
HDDPKTRLMR YLLLAQYKFA LGFVDTVFFQ NPDDMEYFVS KKLVGAGKAV LTYGSGLDLD
EYRLPSTEEI ARARAMLGAE LGVDLRGRKV ALFPARGVPE KGFFEFYRAA KTINALEPDA
YAFLHLGLVD ADAARRISKE GMEQYAADCG VKYLGFKDNI KDYMIASDIV VLPSSYREGT
PRSLIEALAL GKAIVTTDMP GCRETVIDGW NGYLCRKGDE QSLVAKLLAV DGEMLTAARS
RSRRYCETKY DAAWLADLTL GRYQGSLNSE