| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2163 |
|---|
| Symbol | |
|---|
| ID | 3741315 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 2437500 |
|---|
| End bp | 2441105 |
|---|
| Gene Length | 3606 bp |
|---|
| Protein Length | 1201 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637779457 |
|---|
| Product | Integrins alpha chain:multicopper oxidase, type 2 |
|---|
| Protein accession | YP_385117 |
|---|
| Protein GI | 78223370 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2132] Putative multicopper oxidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.00120195 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAACAGGC AACAGCTTTC AATCATTATG AGCCTGGTGC TTGCACTGGC GGCACTTCCC
CTGGCTGCCT ACGCTGGTCC GGGGACAAGG GCGACGCCGC CGGCACCTGA CTACCCTGCG
TCCGCAACGC CCAGCGGAGG CACGTTCTAC GCCAACAGCC CGGCAGGCCC CTGGAAATAC
ACTAACATCA TGGGCACCTA CAGTAGCGCT TCCAGCAATT CCGGAACCCC TCTCAGGAAG
TTTGTCGACT CGCTGCCGGG GCTCGGGTCC GGCGCACGGC CTGCCGGTAC AGCCCTGGGC
GCCAACAACC TCGGGCAGTA CATCCCAATC GCAGCTCCCG ACACGGCCAC GTACCCCGGC
TCGGATTACT ACCAGATCGG TCTGAAAGAC TACCGGGTAC AGATGCACTC GGACCTCCCC
CCCACCGCGG ATGCGTTGGG AACCGGCACT AAGCTGAGGG GGTATTACCA GAAAAACGGT
ACGGACCACT CGTCCAACTA CCTGGGACCT CTGATCATTG CCCAGAAGGA CCGGCCGGTG
CGCATCAAGT TCTTTAACGA ACTGGGCGCT AACGGCGCGG GCGACCTCTT CATACCGGTG
GACACCACGT ACATGGGTGC GGGGATGGGC CCCAACGGGA TGGATAACTA CACACAGAAC
CGGGCCGATC TTCATCTCCA TGGCGGACAC TCTCCGTGGA TCAGTGACGG GACCCCACAC
CAGTGGATCA CCCCGGCCGG GGAGACGAGC ACCCCCTATA CCTCTGGTGC AAGTTTGAGA
AACGTTCCCG ACATGGATGG CGGGATCGAG CCGGCCGGCG CCTCCACCTA TTTCTGGACC
AACAACCAGA GCGGCAGGAT GTTGTTCTAC CACGACCATT CCTACGGGAT AACGCGCCTC
AACGTCTATG CCGGCGAGGC GGCAGGCTAC CTCATAGTCG ATCCCGCGGA AGAGACCTCG
CTGGCCGCCG CCGGCGTCCC CGGCACCATC CGTAATCCAG CCAATCTGGG GGATACGGCA
AATAACGACC TGGCACACAT TATCCCCCTG ATCATCCAGG ACAAGACTTT CGTTCCCCAG
GACATTGCCG TTCAGGATAC GAAATGGAAC GATCCCAAAT GGGGCAAGTA CGGCGACCTG
TGGTTCCCGC ACGTCTACGA AACGAACCAG TGGCCCACCA ACCCGGACCT GAGTGGTGCG
AACAACTTCG GCCGGTGGGA CTACGGCCCC TGGTTCTGGC CGATCTTCCC CGCTGCCGTT
CCGGGACTGC CCACAATGAA CGTGTCCGGC GTGCCTGAAG GGTTCATGGA TACGCCCGTT
GTCAACGGTA CGGCCTACCC GTATATGGAC GTACAGCCCC AGGCCTACCG GTTGCGGATC
CTGAACGCGG CCAACGACCG GATGTTCAAC CTCTCCTTCT TTACGGCCGA CCCGACCCTT
ACCCCCTTTG ACCCGGTGAC CGGCCAGCCG AACCCCGGTT ATCAAAAGGA AGTCAAAATG
GTTCCGGCAG TTCCGCGGCC GGTCTGCAGT GCGACCGTCA CCACGAACTG CACCTGCGCC
GGCGCCCCCG GAACACCGGT TGGCTGTTTC CCGCCGACCT GGCCCACGGA TTCGAGGGCG
GGCGGCGTGC CCGACCCGGC CACAGCCGGC CCGCCAATCA TCCAGATAGG TTCTGAAGGC
GGCCTGCTGC CGGCGCCTAC CGTGATCAAT CCCCAACCGG TCAACTATGA ATACAATCGC
AGAAACGTGG TGGTCCTGAA TGTGTCGGAC AAGGCGCTCT TCCTGGGGCC GGCGGAACGG
GCCGATGTGA TCGTCGACTT TTCCGCCTAT GCCGGCAAGA CCGTCATCCT TTACAACGAC
GGCCCCGCGC CGGTGCCGGC GTTCGACCCG CGCAACGACT ACTACACGGG CTGCCCGGAT
AATACCTCGT CGGGTGGCGC ACCTCCGACA ATGGCCGGTT ACGGTCCCAA CACCCGGACC
ATCATGCAGT TCCGGGTAGC GGCTGCTACT CCGGTACCCT TCAATCCGGC TCCGTTAACC
ACGGCTCTGC CGACGATCTA TGCAGCGTCG CAGCCCGCGC CGGTGATTCC GCAAACCGGC
TATCCCGGCC CCTATAAAGC AACAGCCGAT ACCTATTCCA GAATATCAGA CAACTCCCTG
ACCTTTACGC CGGTCGGCGC CACCGCGCCG GTAACGATGC CCATGAAGTC GAAGGCCATT
CAGGAGCTTT TCACCGCGGA CTATGGCCGC ATGAACGCCA CTCTGGGGGT CGAACTGCCG
TTTACCAACG CCCTTATCCA GACGACGATT CCCCTGGGTT ACATAGACCC GACAACCGAA
CAGCTCAACA ACGGCCAGCC CCAGCTCTGG AAGATCACCC ATAACGGCGT TGACACCCAT
GCCATCCATT TCCACCTGTT CGACGTGCAG ATCATCAACC GGGTCGGCTG GGACGGCATG
ATTCGGCCAC CCGACGCCAA CGAGTTGGGA TGGAAGGATA CGGTCAGGAT GCACCCGCTG
GAAGACATCG TTGTCGCCAT GAGACCGACG ACGCCGCCTG TGCCATTCCC TCTCCCCAAC
AGCGTCCGGC CGCTCGACGT GACAATGCCT CTGGGTACCA CAACGCAATT TACCGGTGTT
GATCCCACTA CCAATACGCC GATCACCGTT ACCAACGAGT TGACAAACTT TGAGCACGAG
TACGTTTGGC ACTGCCATCT CCTGGGTCAT GAAGAGAATG ACATGATGCG GCCAGTTGTA
TTCGCTACCA AGCCGCCACA GGGTGACTTC AACGGCCTCG GCAAAACCGA TATCGCCGTC
TGGCGCCCTG GCACCACCGG CCAATGGTGG ATCAAAACGT CAACTAACAC GCCCGTTGTA
ATAAACCAGG GAATAACCGG AGATAAGCTC GTTCCCGGCG ACTACGATGG CGACAGAAAG
ACCGACGTGG CCGTATGGCG CCCCTCCGAC GGCAACTGGT ACATTACCAA CAGTGCCAAC
GGGACGACCA GTACCATAGG TTACGGAACC AATGGCGACA TCCCCGTCCC CGGCGACTAC
GATGGCATCG GCAAAACCGA GACGGCAGTG TGGCGCCCCT CCAATGGTAC CTGGTATATC
CCCAACAGCG CCAATGGTAC GCAGAGCGTC ATAACGTACG GGACGAACGG CGACATCCCC
GTCGCCGGCG ACTACGACGG CGACGGCAAG ACTGACGTTG CCGTCTGGCG TCCATCCAAT
GGCAGATGGT ACATCAAGAA CAGCGGCTCA ACCACGCAAA CCGTCGTCAG CTACGGCTCG
AACGGCGATA CCCCCGTTCC CGGCGATTAC GACGGCGACA ACAAGACCGA CATGGCCGTC
TGGCGCAACG GCACCTGGTA CATCAAGAAC AGCGCCACCA ATACCCAAAC TGTCGTGAAT
TTCGGCACCG CCGGCGACAT CCCGGTCCCC GGCGACTACG AAAACCTCGG CCGGACGGAA
ATAGCCGTAT GGCGTCCCTC CAACGGCAAC TGGTACATCA TGAATCCGGT GACCCACTTG
CAAACCACCG TAAACTGGGG CGCCCCGACA GACTTGCCCA TCAAGGTATT CCAACCGGTG
AAGTAG
|
|---|
| Protein sequence | MNRQQLSIIM SLVLALAALP LAAYAGPGTR ATPPAPDYPA SATPSGGTFY ANSPAGPWKY
TNIMGTYSSA SSNSGTPLRK FVDSLPGLGS GARPAGTALG ANNLGQYIPI AAPDTATYPG
SDYYQIGLKD YRVQMHSDLP PTADALGTGT KLRGYYQKNG TDHSSNYLGP LIIAQKDRPV
RIKFFNELGA NGAGDLFIPV DTTYMGAGMG PNGMDNYTQN RADLHLHGGH SPWISDGTPH
QWITPAGETS TPYTSGASLR NVPDMDGGIE PAGASTYFWT NNQSGRMLFY HDHSYGITRL
NVYAGEAAGY LIVDPAEETS LAAAGVPGTI RNPANLGDTA NNDLAHIIPL IIQDKTFVPQ
DIAVQDTKWN DPKWGKYGDL WFPHVYETNQ WPTNPDLSGA NNFGRWDYGP WFWPIFPAAV
PGLPTMNVSG VPEGFMDTPV VNGTAYPYMD VQPQAYRLRI LNAANDRMFN LSFFTADPTL
TPFDPVTGQP NPGYQKEVKM VPAVPRPVCS ATVTTNCTCA GAPGTPVGCF PPTWPTDSRA
GGVPDPATAG PPIIQIGSEG GLLPAPTVIN PQPVNYEYNR RNVVVLNVSD KALFLGPAER
ADVIVDFSAY AGKTVILYND GPAPVPAFDP RNDYYTGCPD NTSSGGAPPT MAGYGPNTRT
IMQFRVAAAT PVPFNPAPLT TALPTIYAAS QPAPVIPQTG YPGPYKATAD TYSRISDNSL
TFTPVGATAP VTMPMKSKAI QELFTADYGR MNATLGVELP FTNALIQTTI PLGYIDPTTE
QLNNGQPQLW KITHNGVDTH AIHFHLFDVQ IINRVGWDGM IRPPDANELG WKDTVRMHPL
EDIVVAMRPT TPPVPFPLPN SVRPLDVTMP LGTTTQFTGV DPTTNTPITV TNELTNFEHE
YVWHCHLLGH EENDMMRPVV FATKPPQGDF NGLGKTDIAV WRPGTTGQWW IKTSTNTPVV
INQGITGDKL VPGDYDGDRK TDVAVWRPSD GNWYITNSAN GTTSTIGYGT NGDIPVPGDY
DGIGKTETAV WRPSNGTWYI PNSANGTQSV ITYGTNGDIP VAGDYDGDGK TDVAVWRPSN
GRWYIKNSGS TTQTVVSYGS NGDTPVPGDY DGDNKTDMAV WRNGTWYIKN SATNTQTVVN
FGTAGDIPVP GDYENLGRTE IAVWRPSNGN WYIMNPVTHL QTTVNWGAPT DLPIKVFQPV
K
|
|---|
| |