Gene Gmet_2157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_2157 
Symbol 
ID3741309 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp2430648 
End bp2431400 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content56% 
IMG OID637779451 
Producttwo component AraC family transcriptional regulator 
Protein accessionYP_385111 
Protein GI78223364 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones57 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.0322408 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACTGG CCCAATCCAT AGTTGTTGTT GCCGAACCGA GCCATTCCGA TCTGTATGAC 
TTGCTGGCAG TCGGCAATGC GGGCATCCGG CTCGTATCCG CGGCGGGGCT TTCCACGGCA
ATTGGCCCCA GTGATCCGGA TATCGTCATC CTCGACAGCG GCACCGACGC CGATGGCGGG
ATAACCCTCC TTGGAGAAAT CAAAGCACTT CGCAACGATC TGCCGGTAAT CTTTCTGACC
GATTCCAGCT CCGAGGAGAT CGTCCTCAAG GCATTCAGAA AAGGAGCCCG GGAGTATTTC
CGCAAGCCGG TCGATCTGCA TGTGCTCCAG CATGCGGTTG AAACCATACT CGCCCTTCGC
CGGATGCAGC GGGAGCGCAG AGATCCCCTC AAGCGGCACT ATTCCGATCC CATCAACCTT
CCCGACGACC TTCCCGAATC GATCGGCCGT GCGGTCATGC ACATCAAGAG CAATTACGAC
TGCGCCTTAT ATCTCGACGA CCTGGCCCGC GCGGCCCACC TCAGTAAATT CCACTTCTGC
CGCAACTTCA AAAAGTATAT CGGCGTGAGC CCCATGCGGT TCATGAATAT GGTAAAGATA
AGCAAGGCGG AAACCCTTCT CCGGAGAGCG GATCTCACTA TCTCGACCGT TGCCTACAAG
CTCGGGTTCA ATGATCCGAG TGAATTCACC CGACAGTTCA AGAGCATTAC TGGCATATCC
CCATCTGCAT TCAGACGCTC CTGCCTTAGT TGA
 
Protein sequence
MSLAQSIVVV AEPSHSDLYD LLAVGNAGIR LVSAAGLSTA IGPSDPDIVI LDSGTDADGG 
ITLLGEIKAL RNDLPVIFLT DSSSEEIVLK AFRKGAREYF RKPVDLHVLQ HAVETILALR
RMQRERRDPL KRHYSDPINL PDDLPESIGR AVMHIKSNYD CALYLDDLAR AAHLSKFHFC
RNFKKYIGVS PMRFMNMVKI SKAETLLRRA DLTISTVAYK LGFNDPSEFT RQFKSITGIS
PSAFRRSCLS