| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2122 |
|---|
| Symbol | |
|---|
| ID | 3739458 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 2390071 |
|---|
| End bp | 2391009 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637779416 |
|---|
| Product | cytochrome c, class I |
|---|
| Protein accession | YP_385076 |
|---|
| Protein GI | 78223329 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 0.959895 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 72 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGGATA AGCAGATGGA AAAGGCAGTT TCACGCAAGC TTACATTATT CTGCGTCATC
TGCGGGCTGG CCGTACTGGT CCTTATGGGA GCAACGGTGA TCCGCGACGG GGAGCGGGAA
TGGAAGCATT ACCAGACCCA ATACCGGGAG ATGCTTCTGA AGATGATCAA GAAAGAGGAC
AACCCGACCT TCTATCAGCG GGTTGAGGAG ATGAAGCCGG AGATCCGGCA GATCGTCGTC
GATGAATGGA AGACGGTGGA CCGCTGCACC ACCTGTCACC TGGGGATCGA AGACCCCCTC
TTTGCCAACG CCAAGCAGCC GTTCACCACC CACCCCAATC CGGAGCTGCT GAAGCACCAT
CCGGTGGATA AGTTCGGCTG CACCATGTGC CATGGCGGCC AGGGGCTGGC CACAACCTAC
AATGGCTCCT CCCACCAGCC CATCGACAAC TGGCCCATCA CCCTGGTGTC CAAGGGGCTC
ATGCAATCCC GGTGCGGCTA CTGCCACAAG GATTTCGAGG CCATCAAGGC GGACCGCCTC
ATCAAGGGGC GCGAACTCTA CAAGGAGATG CACTGCGCCG GCTGTCACCA GATCGACGGC
CAGGGGGGGA ACGTGGGGCC GGACCTGAGC AACTTCGCCG ACAAGGACCC CAGCAACTTC
TCCTACGAGA GCATAGAGGG CCCCCACTCC AAGCAGACGT GGGTCATCGA ACACTTCAGG
GATCCCAAGC GGGTCAGCCC CGGCACCCCG ATGCGCACCT ACGCCATGAA CGACGACCAG
ATCGAATGTC TCGCGAGCTA TGTCCTGAGC CTGACCCAGC GGGGTTTCTC GCGCCCCTAC
AGCACCAAGG TGAAGGCTGA CTTTGTGCCG CACAAGGTGG ACGAATACGT CCCCGAACCC
GAATTGTCCG ACTCCGCGGA CGACGCCGAA AGCAACTAG
|
|---|
| Protein sequence | MEDKQMEKAV SRKLTLFCVI CGLAVLVLMG ATVIRDGERE WKHYQTQYRE MLLKMIKKED
NPTFYQRVEE MKPEIRQIVV DEWKTVDRCT TCHLGIEDPL FANAKQPFTT HPNPELLKHH
PVDKFGCTMC HGGQGLATTY NGSSHQPIDN WPITLVSKGL MQSRCGYCHK DFEAIKADRL
IKGRELYKEM HCAGCHQIDG QGGNVGPDLS NFADKDPSNF SYESIEGPHS KQTWVIEHFR
DPKRVSPGTP MRTYAMNDDQ IECLASYVLS LTQRGFSRPY STKVKADFVP HKVDEYVPEP
ELSDSADDAE SN
|
|---|
| |