| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2115 |
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| Symbol | |
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| ID | 3739451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 2381099 |
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| End bp | 2382709 |
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| Gene Length | 1611 bp |
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| Protein Length | 536 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637779409 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_385069 |
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| Protein GI | 78223322 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 81 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACCA AAGTTACCGA AAATTTTCTC AATAGATTTC GAAGCAACAG ATCCCGCCTG
AAAGACGAGG CGTTTCTCCA AAGCTACGCC CTGTTGAGTG TCGTCTTTGA CGAAGCGTTT
CAGTTGATGG GGCTCCTGAA GCCGGACGGC ACCCTCATCA AGATCAATAA AGCCGCCTTC
CGTTCCATCA AGGGAAAGGA ATCGGAAGTT ATCGGCAGGC CCTTCTGGGA CACTCCGTGG
TGGGCTCACT CCCGCGAAGA ACAGAAGCGG GTGCGCGAGG GGATCGAGGC TGCTGCCCGG
GGGGAGTTCA TCCGCTTTGA AACCACCCAC GCGGCGACCC TTGACGGAAG AGTTGCGTAC
ATAGATTTTT CGCTTAAGCC CGTGAAGGAT GAGAGGGGGA ATGTGGTCCT GGTCGTTCCG
GAAGGGCGCG ATATCACGGA ACGACGGCGT GCGGAAGAGG CGTTGCGGGA GGCGGCAATC
AAATACCGGA TCGTCGCCGA CAACACCTTC AACTGGGAAT TCTGGCTGAG CCCGGAAGGA
AGGGTCATTT ACACGTCTCC TTCCTGCGAA AGGGTCTGCG GCTATGAGGC CGACGCGTTC
ACTGCCGATC CCGGCCTGAT CTGGAATATC GTTCACCCCG ATGATCGGCA GCTTGTGGAC
GTCCACCGGC ATGAGGTGAG AGAAGAAAAG GTTATGGGCC AGGTTGAATT CCGCATCGTC
CACCGGGATG GTGATATCCG CTGGATTCGC CATGTCTGCC AGCCGGTGTT CGACGACAAC
GGTACCTACC TCGGCATCCG GGGGAGCTTC TCCGACATCA CCGAACAGAA AAAGGCCGCG
GCCGCCCTCC TGGACAACGC CCGGATCACC CGGGAACTGG AGATAGCCAA GGAGATCCAG
CAGTCGTTCC TGCCGGTATG TCCCTCGGCG TTGCCGGGGG TGCTCATGGC GTGCTGTTGT
CACCCGGCGG CCCATGTGGG TGGCGATTAC TACGATTTCT TCACCCTGGA AGAGGGCGCC
ATCGATATGG TCATCGCCGA TGTCACCGGC CATAGCGTCG GCTCGTCCCT CCTGATGACC
ATGGCCCGCA GTGTGCTTAA CGCCAAGGTC ACCGGCAGCC GCCCCCCCGG AAAGCTCCTC
GAAGTGGTAA ATGACCTGCT CCACGATGAT CTCTCGCGGG CAGAGCTTCA GATCAGCATG
TTCTATATCC GGCTGGACAT CCCCAACCAC ACCGTGTCCT ACGCCAACGC CGGCCACAAC
CATCCCGTTC TCTACCGTTC GGAGCAGGCT GATTTCATTG AACTCGATGC TGACGGAATG
ATCATGGGGG TAAAAAAAGA GGTCGGTTTC GAGGAAAAAA CCATCCTGGT GGCGGCGGGG
GACATCTTCA TCCTCTATAC CGACGGCGTA ACGGAAGCGG AAAGTGCCGC GGGAGAGCCT
TTCGGCACCG GGCGGCTCTG CGAGGCCGTT GCCGCATACC GGGACAACCA TCCGAAAGAG
ATCATGGCCG GGATTTTCCG GAAATTGACC GAATTTACCG GCGACGGGCC TCTTGCTGAC
GATGTGGCGA TGATTATTGT CAAAATTGCA CCATCGGATG AGGCACAGTA A
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| Protein sequence | MQTKVTENFL NRFRSNRSRL KDEAFLQSYA LLSVVFDEAF QLMGLLKPDG TLIKINKAAF
RSIKGKESEV IGRPFWDTPW WAHSREEQKR VREGIEAAAR GEFIRFETTH AATLDGRVAY
IDFSLKPVKD ERGNVVLVVP EGRDITERRR AEEALREAAI KYRIVADNTF NWEFWLSPEG
RVIYTSPSCE RVCGYEADAF TADPGLIWNI VHPDDRQLVD VHRHEVREEK VMGQVEFRIV
HRDGDIRWIR HVCQPVFDDN GTYLGIRGSF SDITEQKKAA AALLDNARIT RELEIAKEIQ
QSFLPVCPSA LPGVLMACCC HPAAHVGGDY YDFFTLEEGA IDMVIADVTG HSVGSSLLMT
MARSVLNAKV TGSRPPGKLL EVVNDLLHDD LSRAELQISM FYIRLDIPNH TVSYANAGHN
HPVLYRSEQA DFIELDADGM IMGVKKEVGF EEKTILVAAG DIFILYTDGV TEAESAAGEP
FGTGRLCEAV AAYRDNHPKE IMAGIFRKLT EFTGDGPLAD DVAMIIVKIA PSDEAQ
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