Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_2109 |
Symbol | |
ID | 3739445 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 2374764 |
End bp | 2376185 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637779403 |
Product | Fis family transcriptional regulator |
Protein accession | YP_385063 |
Protein GI | 78223316 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 86 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGACA CAGAGCAGCA TCTGGAAGAG ATGCTTCGGC TGGCAAATTT CACCATAGAG CGGACCGGCA CCCCCATTGT CTGGGTGGAC TCCACGACCC GTTTTGCACG GGTAAACGAC GCGGCATGCC GGTGTTTCGG TTACTCGCCC GATGAATTCA TCCGCCTGAC TGCCCAGGAC ATCGCCCCGG GGATCCCCAC GGAATTGTGG CCGCAGCACT GGGCAGAGCT GAAGCGGATG CAATTCCGCA CCTTTTCGGA TCATTTCAGA AAACGCTCCG GGGAAAAGTT CCCGGTAGAG GTCGAGGAAA ACTTCATCCG GTTCGAAGGG AGGGAATACT CCTGCAGCTT CATCAAGGAC ATGACCCAGC ATTTCCAGAC CCAGGAAGCC CTGAGGCGGG CCTTGGACGA GGTGCAAACG CTCAAAAACC GTCTGGAAGC CGAAAACGTG TACCTGATGA ACGAGATCAA ACTCTCCAAC AACTTCGATG AAATAGTCAC CGGCAATCCC ATCTTCATGA AGGCCCTGCA GCTTGTGGAA CAGGTTGCCC CCACCGATGC GTCCGTACTT ATCCTCGGAG AAACAGGCGT CGGCAAGGAA CTCATCGCCC GCGCCATCCA TAACCTGAGC AACCGCCGTG ATCGCCCCCT CATCCGGCTC AATTGCGCCG CATTGCCGGC AACTCTCATG GAAAACGAAC TTTTCGGCCA CGAAAGGGGA GCCTTCACGG GAGCGAACTG CCGCAAACCC GGCAGGTTCG ACCTGGCTGA CGGGGGGACC CTTTTTCTCG ACGAGGTGGG TGATCTGCCC ATGGAGTTGC AGAGCAAGCT TCTGCGTGTC TTGCAGGAAG GGGAATTCGA GCGGCTCGGC GGCGCTGAAA CGATAAAGGT CGATGTACGC ATCCTGGCCG CGACCCACGT GGATTTGAAA GCCCTGCTTG CCGAGGGGCG GTTTCGCAGC GACCTGTACT ATCGCCTCAA TGTCTTTCCG ATCCAATGCC CCCCCCTCAG GGAACGCAGG GAAGACATCC CCCTGCTGGT CAGGCATTTT GTCAAAGCCT CCTGCGAAAA GAACGGAAAA AGCATCGAGC TTATTCCGCG CCATGTCATG GAGTCACTGG AGGGGTACCC CTGGCCCGGC AATATCCGGG AACTGCAGAA CGTTATCGAA CGGGCGGTGA TCATCAGCCG GGGAAACAAG CTGGAGATCG ACTCCCTCCC TAAAATGGTC ATAGCCGCCG ATGCAGCCCC CATCTCACCT CTGGAAGTGA CCGAACGGGA ACATATCATC CGTGCTCTCG AAACAACGGC ATGGCGAGTC GGCGGGCCAA AGGGCGCCGC TGAAATCCTC GGACTGAAAC GCACAACCCT CCAGGCGAGG ATGCGCAAGC TCGGCATCAA CCGGCAGGGC CTGCCAGCCT GA
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Protein sequence | MADTEQHLEE MLRLANFTIE RTGTPIVWVD STTRFARVND AACRCFGYSP DEFIRLTAQD IAPGIPTELW PQHWAELKRM QFRTFSDHFR KRSGEKFPVE VEENFIRFEG REYSCSFIKD MTQHFQTQEA LRRALDEVQT LKNRLEAENV YLMNEIKLSN NFDEIVTGNP IFMKALQLVE QVAPTDASVL ILGETGVGKE LIARAIHNLS NRRDRPLIRL NCAALPATLM ENELFGHERG AFTGANCRKP GRFDLADGGT LFLDEVGDLP MELQSKLLRV LQEGEFERLG GAETIKVDVR ILAATHVDLK ALLAEGRFRS DLYYRLNVFP IQCPPLRERR EDIPLLVRHF VKASCEKNGK SIELIPRHVM ESLEGYPWPG NIRELQNVIE RAVIISRGNK LEIDSLPKMV IAADAAPISP LEVTEREHII RALETTAWRV GGPKGAAEIL GLKRTTLQAR MRKLGINRQG LPA
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