Gene Gmet_2105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_2105 
Symbol 
ID3739556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp2371392 
End bp2371997 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content60% 
IMG OID637779399 
Product3-octaprenyl-4hydroxybenzoate decarboxylase 
Protein accessionYP_385059 
Protein GI78223312 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0163] 3-polyprenyl-4-hydroxybenzoate decarboxylase 
TIGRFAM ID[TIGR00421] polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones87 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTTC CATTGGTAGT GGCAATCACC GGCGCAACAG GCGTGATCTA CGGGGTGGAG 
ATGCTGAACG TGCTGAAGGA ACTGGGTCAG GAAACCCATC TCATCGTCAG CGAGGCCGCC
GGCAAGAACC TAGAGATCGA GACATCATAC TCCCTTGACG AGGTCCGGGC CTTGGCCGAC
GTCGTCTATG ACAACAAGGA TATCGGCGCC TCGGTGGCCA GCGGCTCGTT CCGCACCCGC
GGCATGATCG TGGCTCCTTG CACCGTAAAG ACGCTTTCGG CCATTGCCAA CTCGTTCACC
TACAACCTGG TGATACGCGC CGCCGATGTA ACCCTGAAAG AACGGCGCCC CCTGGTGCTC
ATGGTGCGCG AAACACCTTT GCACAAGGGG CACCTGGAGC TCATGTCGCG CGCCACCGAC
TGCGGCGCCC AGATATTGCC GCCAATGCCG GCCTTCTACC ACAAGCCGGA GTCAATCATG
GACATCGTCC ACCAGAGCAT CGGCAAGGCT CTGGACCAGG TGGGGATCGA GCACAATCTC
TTCAAGCGCT GGCACGGGGA CAACCGGAAG GAGCAGGTTC GGGAGTCCCT CAGAATCGCC
AATTAA
 
Protein sequence
MSLPLVVAIT GATGVIYGVE MLNVLKELGQ ETHLIVSEAA GKNLEIETSY SLDEVRALAD 
VVYDNKDIGA SVASGSFRTR GMIVAPCTVK TLSAIANSFT YNLVIRAADV TLKERRPLVL
MVRETPLHKG HLELMSRATD CGAQILPPMP AFYHKPESIM DIVHQSIGKA LDQVGIEHNL
FKRWHGDNRK EQVRESLRIA N