| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2102 |
|---|
| Symbol | |
|---|
| ID | 3739553 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 2367981 |
|---|
| End bp | 2369525 |
|---|
| Gene Length | 1545 bp |
|---|
| Protein Length | 514 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637779396 |
|---|
| Product | carboxylyase-like protein |
|---|
| Protein accession | YP_385056 |
|---|
| Protein GI | 78223309 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
|---|
| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases
[TIGR02724] phenylphosphate carboxylase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 81 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACAA CACAGCTTAA AGTGAAAGAG ATCAACGAAG AACTCGACTC ACGGCCCGCG
GTACCCCCCA TCAACGACAT TCGCAGCTAC ATCGCAGCAC TGGAAGCCCA TGGGGTACTC
CACCGCGTCA AGGCCGAAGT GGACTGGAAA TTCGAACTTG CCCACATCTC CAAGGTGAAT
GAAGAGCAAA AGGGCCCGGC ATTGCTCTAT GAGAACGTCA AGGGGAACAC TATCCCGGTT
TTCACCAGCG CCTTCACCAC CCCCGAACGT ATCGCCATCT GCCTGGAACA GGACCCGTCC
CTCTCCATGT GCCAGCTTTC CCGGAAATGG ATGGAGCTGA CCACCAAGCA GATGATCAAG
CCGACCTTTG TCAAGAACCC GCCGGTCATG GAAAACATCA TTGAAGAAAA AGATGTGGAC
CTGGAAAACT TCCCCGCCCC CTGGTTCTAT CCCGATGACG GCGGCCGCTT CTTCGGCACC
TCCGGGTACC TGGTGACCCA GGACCCGGAT ACGGGCTGGA CAAACCTGGG CACCTATCGT
TCCCAGATCC TGGGCAAGAA CATCCTCGGC TCCCAGATCA TCAGCGGCAA GCACGGCGAC
TTCCACATGA AAAAGTACCA GGAGCGGGGC GAGAAGATGC CGGTCGCCTA CGTGGTGGGG
GGCGATCCCA TACTGTTTTT GGCCTCCTCC ACCCTGGTCA GCGCCCAGAC CGATGAATAC
GACGTGGGGG GCGCCCTGCG CGGCCGTCCC ATCGAAGTAT TCAAGTCGGA TCTTACCGGA
CTGACCCTGC CGGCCAACGC CGAGATCATC GTCGAAGGGT GGATGGATCC CGAGGAGTTG
ATGGAAGAAG GGCCGTTCGG CGAGTACACC GGCTATTACT CGGGCAACAA GATGAAGGAC
TATCCCAAGC CGGTCATCCG CGTGAAACGG ATCATCCATC GCAACAAGCC GATCTTCTGG
TCAACCACGG TCGGCAAGCC GATCAACGAC ACCCACATGG TCCAGTCCAT CAACCGTACG
GCCACCCTGT GGCACGACTT GGAGACCATG AAAGTGCCGG GCATCCAGAG CGTCTACTTC
CCCGCTGCGG CCACCGGCCG TTTCTGGGTC GTCGCCTCGG TCAAGCAGAT GTATCCGGGT
CACTCGAACC ACGTGGCCGA TGCCATCAAC GGCAGCACCA CCGGTCACTA CGGCGTCAAG
GGGATCATCA TCGTCGACCA TGACATAGCC GCCGACGACA TGGATCGTGT CTGGTGGGCG
CTGGCCGTAC GTTTCGATCC GAAACGCTCA ACCCAGATCA TCACCCGCGG ACGCTCTACC
CCGCTCGACC CGGGCCTCCC CATCGAGGCG CGCGACGTGG TCAGCCGCAT CATCCTGGAT
GCCACCATAC CATACGAGTG GAAAAACAAG CCGAACGAGA TCTTCATGGA TCGGACGGTG
CTGCAGAAGG TTTCCGACCG CTGGAATGAA TACGGCTTCA CCGGCGCAAG CCCGGTCGCC
GAGATGATCC CGCGTCTCAC CCGGCCGGAA GTGAAGAAAA AATAG
|
|---|
| Protein sequence | MSTTQLKVKE INEELDSRPA VPPINDIRSY IAALEAHGVL HRVKAEVDWK FELAHISKVN
EEQKGPALLY ENVKGNTIPV FTSAFTTPER IAICLEQDPS LSMCQLSRKW MELTTKQMIK
PTFVKNPPVM ENIIEEKDVD LENFPAPWFY PDDGGRFFGT SGYLVTQDPD TGWTNLGTYR
SQILGKNILG SQIISGKHGD FHMKKYQERG EKMPVAYVVG GDPILFLASS TLVSAQTDEY
DVGGALRGRP IEVFKSDLTG LTLPANAEII VEGWMDPEEL MEEGPFGEYT GYYSGNKMKD
YPKPVIRVKR IIHRNKPIFW STTVGKPIND THMVQSINRT ATLWHDLETM KVPGIQSVYF
PAAATGRFWV VASVKQMYPG HSNHVADAIN GSTTGHYGVK GIIIVDHDIA ADDMDRVWWA
LAVRFDPKRS TQIITRGRST PLDPGLPIEA RDVVSRIILD ATIPYEWKNK PNEIFMDRTV
LQKVSDRWNE YGFTGASPVA EMIPRLTRPE VKKK
|
|---|
| |