| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2083 |
|---|
| Symbol | |
|---|
| ID | 3739534 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | - |
|---|
| Start bp | 2341789 |
|---|
| End bp | 2342427 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637779377 |
|---|
| Product | methyl-viologen-reducing hydrogenase, delta subunit |
|---|
| Protein accession | YP_385037 |
|---|
| Protein GI | 78223290 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1908] Coenzyme F420-reducing hydrogenase, delta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.0566289 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 75 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGTACCG GCAGAGTGGA CCTGGCATTC GTGCTCAGGG CATTCTCCAA GGGGGCGGAC
GGGGTGTTCA TCGGCGGCTG CTGGCCCGGC GAATGCCACT ATGTCACCGA AGGCAACTAC
GATGTGCTGA AGAACGTGCA CATCGCCAAG AAGATCCTGG AGCGGATCGG CATCAATCCT
GACCGGCTGC GGCTCGAATG GATCGCCGCC TCGGAGGGGA TGCGGTACGC CGAGGTGATG
AACGACTTCG GCAAGAGGCT GAAGGAACTG GGGCCGTTGG GCAAAGGGGA AGGAATAGAG
CCGGGCGCCC TGAAGCTCAG GCTGGAAGCA GCCAACAAGC TGGTCCCCTA TGTGAAGCTG
GTGGAACGGG AACGGCTGCG GCAGCGCTTC AAGACGGAGC AGGAGTACAC TGATTTCTTC
GCCAGTGATG AGCTGAAAAA GCTCTTTGAC GAACTGGTGG CAAACAAGCT GGCGGTGAGC
CAGATTACGC TGCTCCTGCA GGACAAGCCC CTGAACACGG GAGAGATCGT AACAACTCTC
GGCATGAACG CATCTGAAGT ATCACGGCAC TTGAAGAGCG CGACCATGCA CGGGCTGGTC
AGGTTCGACG AAGAGCTGAA GCGGTACGCA CTGGCCTGA
|
|---|
| Protein sequence | MCTGRVDLAF VLRAFSKGAD GVFIGGCWPG ECHYVTEGNY DVLKNVHIAK KILERIGINP
DRLRLEWIAA SEGMRYAEVM NDFGKRLKEL GPLGKGEGIE PGALKLRLEA ANKLVPYVKL
VERERLRQRF KTEQEYTDFF ASDELKKLFD ELVANKLAVS QITLLLQDKP LNTGEIVTTL
GMNASEVSRH LKSATMHGLV RFDEELKRYA LA
|
|---|
| |