Gene Gmet_2060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_2060 
Symbol 
ID3738654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp2314429 
End bp2316336 
Gene Length1908 bp 
Protein Length635 aa 
Translation table11 
GC content62% 
IMG OID637779354 
Productfusaric acid resistance protein region 
Protein accessionYP_385014 
Protein GI78223267 
COG category[S] Function unknown 
COG ID[COG1289] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.065197 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.166692 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATAAAG ACACCGTGAT TGACATGCTT ACCCTTACCG TACGCAGGCA ACTCGCCCTC 
CAGCGGCCAC AACTGATGCT CGCAGTCCGC GGTACCGCTG CCGCCCTCAT TTCCCTTGCG
GTAGCCGTGC TGTTGCGTCT GGAATCTCCC TACTGGGCGG CAATGACGGC GATCATCGTG
ATCCAGCCGA CACGGGGGCT TTTGCTGGAA AAGAGCTATT ACCGCCTCGT CGGCACGGCC
ATCGGGTCTG CGGCAGGGCT GCTGCTCATG CTGCACGTCA CGTCGCCTCT GGTTCTCACC
CTTGCGCTTT CCCTCTGGCT GGCAGGGTGT GTCGGCATCG GCAACCTGAT ATATGGCCTC
CGCTCCTACG CCATTCTTCT GGCCGGCTGT ACCTGTGCCA TCATTGGCGC CCGCGCCTAC
CAAACCCCTC TCCATCTCCA TGACCTCGCA TTCGGAAGAA TCGCCGGGAC GATTGTTGGA
ATCATGGTCG CGACGACGGT CACGCTCCTT TTTACCCCAC GCCAGTCGAA GGACGACTAT
GTGGACCGAC TGCGCCGGGT TTCCGGGGAG GCCGTCGCGT GGCTGGCGCT GCTGCTGCGT
CATGGGGGCG AGAGCAGCCA GGTGCGGCTG GAACAGGAAA TTCTGCTGGA GATCGCGGAG
ATTGAAAGCC TCATCGACGT TGTTGGGGCG GGGTCGCTGC GCTTCAAGAG GAAAAAGCGC
CACATTCGGA GTCTCGTTGC CTCGCTCCTT TCCCTTCTGG CCGCCGGTCG GTCGGTTGCC
CTGGGAAGCG GTCAGCATGC CTCCCGTGAT GATCGGCTGA GCCAACTTGT CCTGCGCCTT
GAGGAGGTTG CCGGTAACCT GAAAGGACAC ACAACAGCCT CCTCATGCAT CGACGATCTC
CAGGGGGTTG CGGCTGAGAC CGCAGCCAAT CTTCCCCTTC TGGGGGAGAC GCTGACAGAC
CTCGTGTCGG CCCTTCGACT CGTTCTGTCG GAGTTCGATA CTGCGCCGGA CACTCCTGAT
GAGGAAACCG CGACCCGGCT CATCCGCCAT CGGGATTGGG AGGCGGGGCG GCGGGCTGCG
TTGCGAGCCG CAGTCGCGAT ACTTGTCGTG GGGCTTATCT GGCAAGTTAC CGGGTGGAAG
CAGGGGGCAG TGATGCTCAT GCCCGCATCC ATCATGGTCA GTCTCTTTTC CACGCGGGAT
TTTCCTGCCG ACACGCTGGT TCACGTCTTT GTCGGCGCCT CGATCGGTTC CGCGGCGGCC
CTTCTCTGCC GGCTGATTCT GCTGCCGGGG GTGACCAATC CCCTCGTGGA AGGAGTCGTA
ATCGCTCCGC TGATCCTTCT CGGCGTCTTC GCCATGCAGT ATCGACAAAC GGTGGCTGCC
GCCACCGACG CCACACTCAT CTTCATGTTC GTCGAGCAGC CCGGCGTTCC GCTCACCAGT
ACGGCTTACG ACCTGCTGAC CGGTGCCTTT GCCACCGTGG CCGGTATCGG GATTGCCTGG
GCCTCGTTTC ACTACCTGAT GCCGATCAAT CCGGCAATGC GGATGCATTC CCTTCTGATT
GCCATTGTGC GGGACCTTCA TGTCATGGCA GAGAGTGAAT CCTCCGGCAT GGCAGAGCGA
TTGCTGGCGC GCCTTCAGCA CCGTGTCATC CGCCTGGTAG CCATGGCAAA GAGCTTCGAC
GCCGACCACC TTGTGGTGGT GGAGGGGGGA TTGGCGGCAC TGGTCATCGG CAGGTGCATC
CAGCGCCGGA AGGAATTGGA AAAGAATGGC CTCCTTTCTG CCGAGGCCCA CAGGGCCTAT
CAGGAGACCG TGGCCCAAAT GGCTTCTCTG TTGCAGCGAC CGGAAGGGAG CCTCCCGGTG
CTGGAGAGCG CGGCTGCCAG ACTCTGTGCG GCACTTGCCC CTCACTAG
 
Protein sequence
MHKDTVIDML TLTVRRQLAL QRPQLMLAVR GTAAALISLA VAVLLRLESP YWAAMTAIIV 
IQPTRGLLLE KSYYRLVGTA IGSAAGLLLM LHVTSPLVLT LALSLWLAGC VGIGNLIYGL
RSYAILLAGC TCAIIGARAY QTPLHLHDLA FGRIAGTIVG IMVATTVTLL FTPRQSKDDY
VDRLRRVSGE AVAWLALLLR HGGESSQVRL EQEILLEIAE IESLIDVVGA GSLRFKRKKR
HIRSLVASLL SLLAAGRSVA LGSGQHASRD DRLSQLVLRL EEVAGNLKGH TTASSCIDDL
QGVAAETAAN LPLLGETLTD LVSALRLVLS EFDTAPDTPD EETATRLIRH RDWEAGRRAA
LRAAVAILVV GLIWQVTGWK QGAVMLMPAS IMVSLFSTRD FPADTLVHVF VGASIGSAAA
LLCRLILLPG VTNPLVEGVV IAPLILLGVF AMQYRQTVAA ATDATLIFMF VEQPGVPLTS
TAYDLLTGAF ATVAGIGIAW ASFHYLMPIN PAMRMHSLLI AIVRDLHVMA ESESSGMAER
LLARLQHRVI RLVAMAKSFD ADHLVVVEGG LAALVIGRCI QRRKELEKNG LLSAEAHRAY
QETVAQMASL LQRPEGSLPV LESAAARLCA ALAPH