| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2046 |
|---|
| Symbol | |
|---|
| ID | 3739826 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | - |
|---|
| Start bp | 2298011 |
|---|
| End bp | 2298883 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637779340 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_385000 |
|---|
| Protein GI | 78223253 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.000000420492 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.0000188727 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGACAGTG ATAGCCTCAT AAGAAATGAG TTTGCGCGGA ACATAGGTCT TCTTACTGTT
GAGGAACAAA AACGGCTACT GGCCTCACGA GTTGCGGTGG CTGGCGCGGG TGGGGTAGGG
GGTATTCATG TACTTACTCT GGCTCGGCTT GGCGTTGGCT GTTTCACTAT AGCCGACCAT
GATTCGTTCG ACGTGGTAAA CATAAGCAGG CAATTTGGGG CATTCCACAG CACCCTTAAC
CGCAATAAGG CGCAGGTGCT GGCGGAGATG GTGAAGGATA TCAACCCGAA TGCCGAAGTT
CGCGTCATGG AAGAGGGTGT TACGGAAGAC AACATTAATG CATTCCTTGA TGGCGTCGAT
GTCTATGTGG ATAGCATAGA CTTTTTTGAG ATAGATATGC GTCGCCTCAT CTTCAACAGT
TGCCGTGCAA AAGGCATCTA TGCGCTGACT GCTGCTCCCC TCGGTTTCGG CGCCACGTTG
CAGGTTTTTG ACCCTGAAGG GATGAGTTTC GACGACTACT TCGGCATTGA TGATCAGACG
CCTCCGCTGG AGAAAATTGC AGCTTTTGCC GCCGGCTTGA CTCCGAATCC CTATCATCTT
TCCTACATGG ATGCCAGCCG GGTGAGCTTC AAGCGGCGTA CCGGACCGGC GGTATCTCCA
GCATGCACCC TGGCCGCTTC ACTTGTGGCG ACCGAAATCG TGAAGATCCT GACCGGTAAG
GGAGAGCTTC GCCCCATCCC CTGTTATCTT CAATTCGACA TGCTTCTTAA TAAGGTGAAA
ATGGGGAAAA TAGCATTGGG GGCGAAGAGT CCATCCCAGA AGAAAAAGCG TCGCCTCATC
ATGGAAAACC TGCTCATGAA GTCGGAGGAT TAG
|
|---|
| Protein sequence | MDSDSLIRNE FARNIGLLTV EEQKRLLASR VAVAGAGGVG GIHVLTLARL GVGCFTIADH
DSFDVVNISR QFGAFHSTLN RNKAQVLAEM VKDINPNAEV RVMEEGVTED NINAFLDGVD
VYVDSIDFFE IDMRRLIFNS CRAKGIYALT AAPLGFGATL QVFDPEGMSF DDYFGIDDQT
PPLEKIAAFA AGLTPNPYHL SYMDASRVSF KRRTGPAVSP ACTLAASLVA TEIVKILTGK
GELRPIPCYL QFDMLLNKVK MGKIALGAKS PSQKKKRRLI MENLLMKSED
|
|---|
| |