| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2032 |
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| Symbol | |
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| ID | 3739812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 2274011 |
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| End bp | 2276662 |
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| Gene Length | 2652 bp |
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| Protein Length | 883 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637779326 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_384986 |
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| Protein GI | 78223239 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | [TIGR02917] putative PEP-CTERM system TPR-repeat lipoprotein |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.192732 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.125101 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTTTAACA GACGTATTGC ACTGATTTGT CTTATTGTGG CGACTCTTTC CGCTTGTGGG
GGGAAAACGA AGGAAGAGCT CTACGCCGAG GCAGTTAAGG AACTGGACAA GGGCAACGCC
AATGGAGCGA TTGTTCTTCT GAAAAATGCC GTTGAAAAAG ATCAAAATTA TTTCGACGCC
CGTTACAAGC TTGCGAAGGC CTACATGACA GTGGGCAAAT TCGAACAGGC GGAAAAAGAG
TTCCAGAAAG CACTCCGGCA AAATCCGTCC AATCCGGAGA TAAGGCTTGA TCTGGCAAAA
CTCTACAATT CAATCAACAA GCCTGACGAG TCAATAGCTG AGGCCAAGGC GTATCTCTCC
GCACGGGCCG GATCGGCGGA TGCCCTGGAA GTGATTGGCA CGAGCTACGG CCAAAAGAAG
ATGTTCGATG AGGCCGAGAA ATACTTGAAG GAGTCTCTCC AGGCTGAACC TGCCCGTGCT
TCGGCAATGC TGCAATTGGC AAAGGTTTAT CTGGCGACGA AGCGGGAGCA GGAAGGGATG
GGGCTCCTCA ACGAGATCGT TCGGAAAGAC CCTAAAAACA CCAAAGCATA CTATCTTGCC
GCCTTCTATG AAGGATATCG CGGCAACAGT GAAAAGGCCC TTGAATACTA CCAAAAGATC
ATGCAGGCGG ATCCCGATGA TGCCAATGCG GCCTTCAGGA TTGGCATGAT GCATATCAGC
AAGGGTGAAG TGGACAAGGC TGAACGCCTT GCCGATGACC TGATCAGGAA AGCGTCCAAA
CGGCCGGAAG GACACCAACT TAAGGGGATT GCTCTCTATA CCAGGAAAAA CTACGACCAG
GCAATCACCG AACTTCAAGG TGTCGTGAAA AACTATCAAA ATCCCGGTGC CTACTACTAT
CTGGGCTTGA GTTACTATCA ACGCAACGAT CTTGAGAGCG CCCTGAGCCA GTTCCGCAAA
GTGATTGACC TCAACCCGAA GCATCTGCAG GCCCGGCTCA TGTCCGCGAC GGTTCTGCTT
CAGCAGAAAC GCACCGATGA TGCCATCACC GAGGCCAAAC GAGTCATTGA GCTGGACGAC
AAGAATGCCT TTGCCCATAA CGTCCTCGGC AGCGCCTACA TTGCCAAGGG GATGACTGAC
GAGGCAGTCA GGGAGCTCAA CCGCGCGATC GAGCTTGAGC CGAAGCTGGT CGGTGCCCAC
ATGAAGAAGG GGATCGTTAA CCTGGCGCGC GGAAAGAGGG CGGAAGGCGA GGAAGAGCTT
GAAACGGCAG TGAAGGTCGC TCCCGATGTT CTCAATAGCC GGTATCTGCT GGCAAGCTAC
TACATGCGCC TGAACAAACA GGCCCGTGCC ATCGAGGTGC TCAGGGCGGG GCTGAGGGGA
GGCAAGCAGG ATGCTCCTCT CTACAATACA ATGGCCGCTG CCGCCTTCGC CGACAAGCGG
GAGAAGGATG GCATTTTGTA TCTTCAAAAG GCGCGGGAAG TCGATCAGGC ATATCTCCCG
GCTTCCTTCA ACCTGGCATC CTATTACATC AGCAAAAAGG ACAATGGGCG CGCAGCCGGC
TTGTTCAACG AGATCCTGAA GCGTGATCCG GCCAACCTCA AGGCGTTGAT CGGCCTCGGT
GCCATCAGCG AATCGGAGGG GAAGGCGCAG GAGGCAGTCG CCTACTATAC CAAGGCCAAG
GCAACGAAGG ACCCCGTCGG CTATCTCTCT CTTGCATCCT ACTACATCAG GAAAAAGGAG
GCGCCCAAAG CCCTTGCTTT AGCAAACGAG GGGTTGAAGG GGGCTCCGAA CAATGCTGCG
CTACTGGAGT TGAAGGGTGG ACTTCTCGCA GCCGATAAAA AGTACGCGGA GGCCCTCAAA
GTCTATGATG AGCTGGAAAA GGTCGCCCCG ACCCGTGCGA TTCCGCTGAA AATCGGAGCC
TTGGTGGTAA CCAAAAACAT TCCCAAGGCC GTGGAGCAGG CACAGAAGGT TGTCGCAGCC
AACCCCAAGT CTGCGGCCGG GCATCTTGTT ATTGCGTCGA TCTACGAGAG CCAGAAAGAC
TATGACCGTG CCATTTCGGC TGTCAGAAGC GGCATAGCAG TTGAGCCCGG CAATCTCCGG
GCGTCCATGG CCTTAGGCGG GATCTACGAG AAGAAACGGG ATTTTGCCAG AGCTATTGCC
GCCTATGACG ATATCCTCAG GAAGAATCCC AAGAATATTC CTGCCCTGTT TGCCAAAGGA
GCGGCTTTCG ATCAATCGGG CAAGAAAAAA GAAGCTGCCG GTATCTATCG GGCCGTACTT
AAAATAGCGC CTGATTTTGT ACCCGCACTT AATAACCTGG CATATCTTGC TGCCGAAGGA
TATGGAAACA AGTCAGAGGC GTTGTCCCTG GCCAGTCGGG CAAACAAGCT CCAACCCAAT
AACGCCGGGG TCATGGATAC CTACGGCTAT GCGCTGCTGA TTAACGGCAA GAGGACCGCA
TCGGTCAGAG TGCTCGAAAA GGCAGTCTCT CTCCTTCCGA ACAACCCCGC CGTGCACTAT
CACCTTGCCA TGGCTTATCG TGACATGGGT GACAGGGCAA AGGCCAGCGT CAGTGTCCAG
AAATCTCTTC AATATGGGGA ATTCCCCGAA AGTGCCGCGG CAAGGAAACT TCTTGCCGAA
CTGAAGCGCT AG
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| Protein sequence | MFNRRIALIC LIVATLSACG GKTKEELYAE AVKELDKGNA NGAIVLLKNA VEKDQNYFDA
RYKLAKAYMT VGKFEQAEKE FQKALRQNPS NPEIRLDLAK LYNSINKPDE SIAEAKAYLS
ARAGSADALE VIGTSYGQKK MFDEAEKYLK ESLQAEPARA SAMLQLAKVY LATKREQEGM
GLLNEIVRKD PKNTKAYYLA AFYEGYRGNS EKALEYYQKI MQADPDDANA AFRIGMMHIS
KGEVDKAERL ADDLIRKASK RPEGHQLKGI ALYTRKNYDQ AITELQGVVK NYQNPGAYYY
LGLSYYQRND LESALSQFRK VIDLNPKHLQ ARLMSATVLL QQKRTDDAIT EAKRVIELDD
KNAFAHNVLG SAYIAKGMTD EAVRELNRAI ELEPKLVGAH MKKGIVNLAR GKRAEGEEEL
ETAVKVAPDV LNSRYLLASY YMRLNKQARA IEVLRAGLRG GKQDAPLYNT MAAAAFADKR
EKDGILYLQK AREVDQAYLP ASFNLASYYI SKKDNGRAAG LFNEILKRDP ANLKALIGLG
AISESEGKAQ EAVAYYTKAK ATKDPVGYLS LASYYIRKKE APKALALANE GLKGAPNNAA
LLELKGGLLA ADKKYAEALK VYDELEKVAP TRAIPLKIGA LVVTKNIPKA VEQAQKVVAA
NPKSAAGHLV IASIYESQKD YDRAISAVRS GIAVEPGNLR ASMALGGIYE KKRDFARAIA
AYDDILRKNP KNIPALFAKG AAFDQSGKKK EAAGIYRAVL KIAPDFVPAL NNLAYLAAEG
YGNKSEALSL ASRANKLQPN NAGVMDTYGY ALLINGKRTA SVRVLEKAVS LLPNNPAVHY
HLAMAYRDMG DRAKASVSVQ KSLQYGEFPE SAAARKLLAE LKR
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