Gene Gmet_2028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_2028 
Symbol 
ID3740685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp2269313 
End bp2270164 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content57% 
IMG OID637779322 
Productpolysaccharide biosynthesis protein, putative 
Protein accessionYP_384982 
Protein GI78223235 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0489] ATPases involved in chromosome partitioning 
TIGRFAM ID[TIGR01007] capsular exopolysaccharide family
[TIGR03018] exopolysaccharide/PEPCTERM locus tyrosine autokinase 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.150521 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGGA TAGAGAGCAT CCTTGAAAAA GCTGCGAAAA TGCGGCAGGA CAAGACCCCG 
GGGGAGAGCA GGGTTTTGGT GGAACAGCGG GAAGTGCCCA GGGCGGTTAT CGAGCCTGAG
GTGTTTCAGC CCGACACCAG GATTGCAGTG GACAACCCCT ATCTGGTTAC GATCAGCGAA
CCCCGTTCGC CGGTCACGGA AGAGTATCGC AAACTCAAGT CGATCATCCT CAAACTGACA
AATTCGGGTC AGTTCAAGAA CACCATCATG GTCACCAGCG CCGTAAGCGG CGAAGGGAAG
ACCATCACCT CCATCAACCT GGCGGTGGCC CTGGCCCAGG AGTTCGACCA CACGGTGCTT
CTGGTCGATG CCGACCTGCG CCGTCCCGGC ACCAGCAGCT ATCTCGGCAT CAGGGCCGAA
GTGGGCCTGA GCGACTGTCT GTACGGCAAG GTCGATGTAA AAGACGCCCT GGTTAAAACG
GGAATAGGGA AGCTCGTGGT ACTCCCCGCC GGCAGCAGGG TGGAGAACCC GGTGGAACTT
CTCTCTTCCG GTCGGATGCA AAGCTTCATT GCCGAAATAA AGAACCGCTA CCCCGACCGA
TATATCATCA TCGACACGCC GCCGCTCCTT TCCTTTGCGG AAACCTACTC CCTGGCCAAT
ATGGTCGACG GGGTCGTGTT CGTGGTGAAA GAGGGGGGCG CCACCATGAG CAACGTCAAG
GACGCCCTCG GTCATCTCAA GAAGGAAAAG GTCTACGGCG TTGTCTATAA CAACGTCGGC
ATCAACCGGT TCGACGAGAA CTACCGGTAC CGCAATTACT ACGCATACTA CAAGGATAAT
GGTGCCCAAT GA
 
Protein sequence
MSRIESILEK AAKMRQDKTP GESRVLVEQR EVPRAVIEPE VFQPDTRIAV DNPYLVTISE 
PRSPVTEEYR KLKSIILKLT NSGQFKNTIM VTSAVSGEGK TITSINLAVA LAQEFDHTVL
LVDADLRRPG TSSYLGIRAE VGLSDCLYGK VDVKDALVKT GIGKLVVLPA GSRVENPVEL
LSSGRMQSFI AEIKNRYPDR YIIIDTPPLL SFAETYSLAN MVDGVVFVVK EGGATMSNVK
DALGHLKKEK VYGVVYNNVG INRFDENYRY RNYYAYYKDN GAQ