| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2020 |
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| Symbol | |
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| ID | 3740677 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 2260126 |
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| End bp | 2261697 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637779314 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_384974 |
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| Protein GI | 78223227 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | [TIGR01733] amino acid adenylation domain
[TIGR03098] acyl-CoA ligase (AMP-forming), exosortase system type 1 associated |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 0.256098 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCTGA GACCGTATCT GCTAGGCCAT CTGCTGGAAG ACACCGCCGC GCGGTTGCCC
GATAAGGTTG CTGTCAAGCA CCACGACCGG ACCATCACCT ATGCCCAACT GCACGAGGAA
GCGCTCAAGA TGAAGGGGCT TATCCGCGGG CTCGGCATCA AGCGGGGCGA GCGGGTCGGC
ATCTACCTCG ACAAGTCCAT CGAGCAGCTC ACCGCCATGT TCGGCGCCAC CCTGGCCGGG
GCGGTCTTTG TCTTCATCAA CCCCATCCTC AAGAAAGAGC AGATCGAATA CATCGTCAAC
GATTGCCAGA TCCAGCTCAT GATCACCACC AGCGAGCTGT TCCGCAAGAA CCACCTGGCC
GCGCCCGGAA AGCTCATCCA TGTGGACGAG CCGGAGCACG ACCGGGAAGG GCACCCCTGC
TGGCCCAAGC TCAAGGCAAC GCTCCCGGCT GATTACACCC CCGTTCCCGG CTTCTCCCCG
GACATCGCCT GCCTCATCTA CACCTCCGGT TCCACCGGCA TGCCCAAGGG GGTGGTGGTG
CCCCACAGCA CCGTGGTGGA CGGGGCCGAG ATCGTCAGCA CCTACCTGGA GATCACCGAG
AAGGACCGGA TTATCAGCGT CCTTCCCTTC AACTTCGACT ACGGCCTCAA CCAGGCCACC
ACCGCCGTCC TCCACGGCGC GACCCTGGTG CTGCACCAGT TCGTCATGGT CAAGGATCTC
CTGGACCTCC TCGTCAAGGA AGAGATCACC GGCTTTGCCG GCATGCCCCC TATCTGGGCC
AAGCTCTTCA ACGACAAGAT CAAGCTCACC TACAACTCCG ACTTCCCCCA CCTGCGCTAC
CTCACCAACA GCGGCGGCAA GGTGCCCCGG ATCATGGTCT CCCGCATCCG CGAGTTTTTC
TCCAACTCCC GGCTCTTCCT CATGTACGGG CTCACCGAAG CATTCCGCTC CACCTTCCTT
CCCCCCGAGG AGCTTGACCG CCGGCCCGAC TCCATTGGCA AGGGGATTCC CAACGTGGAG
ATCCTGGTGG TGAACGCCAA GGGCGAAGAG TGTGCCCCGG GCGAAGAGGG GGAGCTGGTC
CACCGTGGCG CCCTCATCAC CCACGGCTAC TGGAACGACC CGGAAAAGAC CAAGGTGATC
TTCCGGAAGA ATCCCCGTTT CCACGATCAG CCCCACCTGC ACGAGACCGT GGTCTACTCC
GGCGACATCG TGAAGAAGGA CGAGGACGGC TTCCTCTACT ACGTCTCCCG CCGCGACGAG
ATGATCAAGA CCTCCGGCTA CCGGGTGAGC CCCACCGAGG TTGAAGAGGT GCTCATCGGC
TTGCCTGGCG TGAGCAACGT GGTTGTCTTC GGCAAGGAAG TGGAGTCGGG CGACCAGATC
ATCGTGGCGG TCATGGAGAC TGACCACGAG GAGGAACACA AGAAGGAGCT GCTCAAGGAG
TGCCGCAAGC GGCTCCCCAC CTACATGGTC CCCCAGGAGA TTCACTTCGA GAAGGCGTTC
AGGAAAACCG CCAACGGCAA GATTGACCGC TCGGGGATCA AGAAAGAGTG GCTGGCGGCA
GGGAAGAATT GA
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| Protein sequence | MSLRPYLLGH LLEDTAARLP DKVAVKHHDR TITYAQLHEE ALKMKGLIRG LGIKRGERVG
IYLDKSIEQL TAMFGATLAG AVFVFINPIL KKEQIEYIVN DCQIQLMITT SELFRKNHLA
APGKLIHVDE PEHDREGHPC WPKLKATLPA DYTPVPGFSP DIACLIYTSG STGMPKGVVV
PHSTVVDGAE IVSTYLEITE KDRIISVLPF NFDYGLNQAT TAVLHGATLV LHQFVMVKDL
LDLLVKEEIT GFAGMPPIWA KLFNDKIKLT YNSDFPHLRY LTNSGGKVPR IMVSRIREFF
SNSRLFLMYG LTEAFRSTFL PPEELDRRPD SIGKGIPNVE ILVVNAKGEE CAPGEEGELV
HRGALITHGY WNDPEKTKVI FRKNPRFHDQ PHLHETVVYS GDIVKKDEDG FLYYVSRRDE
MIKTSGYRVS PTEVEEVLIG LPGVSNVVVF GKEVESGDQI IVAVMETDHE EEHKKELLKE
CRKRLPTYMV PQEIHFEKAF RKTANGKIDR SGIKKEWLAA GKN
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