Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_2019 |
Symbol | |
ID | 3740676 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 2258867 |
End bp | 2260126 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637779313 |
Product | Orn/DAP/Arg decarboxylase 2 |
Protein accession | YP_384973 |
Protein GI | 78223226 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase [TIGR03099] pyridoxal-dependent decarboxylase, exosortase system type 1 associated |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 0.225254 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCCTGA CGGAACAAAA CGGCAAAACC TGCCTGCGGA ATATCTGCTT CGAGGAGCTT GCCGCGCGCT ATGGCACCCC CTTCTACCTC TACGACCTGG ACAAGGTGAA GGAGAAGTGC GCTGCCGTCC GCAAGGCCTT CGGCGACAGC CTCGAACTCC TCTACGCCGT CAAGGCCAAC CCGAACCGGG AACTCCTGGC AGCCATGCGG GGCGAAGTGG ACGGCCTCGA CATTGCCTCG GCCGGCGAGC TGGAGCGCGC CCTGGAGACC GGCTATGACG CGGGGTGCAT CAGCTTCGCC GGTCCGGGCA AAACCCGCGA CGAGCTGCGC CGCTCCCTGG AGGCCGGGGT TGGCTGCATC AGCGTCGAAT CGCTGCGCGA GCTTAATGAC CTGCGCGATC TGGTTCGGGC CGGTTCGCAT CGGGCTTACA TTTTGGTGCG GGTCAACCCC CAGCTCCTCA TTAGGGACTT CGCGGTGAAG ATGGGTGGTA AGGCTTCCCA GTTCGGTATC GACGAGGAAG AACTGCCATC GGCCCTGGAC TTCATCAAGG CCAATGCCGA TGCGTTTGAC TTCAAGGGAA TCCACATCTA CGCCGGCACC CAGTGCCTGA ACGAGGAAGC CCTGGCACAG AATCTCGCCA ACACCCTGGC CATAGCGGCC CGGATTACCA CCGACTACGG CATGGAGTGC CGGGTCATCA ACATCGGCGG TGGGCTCGGG GTCTCCTACT ACGAAGAGCA TCCGGGGCTC GATCTGGACA AGCTGGCCCT CCTTTTCAGG GCCGAGTTCG ACCGGTACCG CGAGGCCACG GGGACAAAAC CCCGCATCCT CCTGGAGCTG GGACGGTTCC TGGTTGCCGA GGCCGGAATC TACGTAACTC GGGTGGTGAG TGAAAAGCTG TCGCGGGGCG AGCAGTTCTA TGTTCTCGAC GGGGGGATGA ACCACCACCT GTCGGCATCG GGCAATCTCG GCATGACCAT TAGGAAGAAC TACTTGGTCC GCAACCTTTC GCGGCCCGGT GCGGAACGGA TAATCTGCAC CCTTGTCGGT CCCCTCTGCA CCCCCCTTGA TCTGATGGGG AAGGGGGTGA CGGTGGAGGT GCCGGAGGTG GGGGATCTGG TCGGGTTCCT GAATTCGGGG AGCTATGGGT ACAGTGCGAG TCCGCTGCTC TTTTTGGGGC ATGGGGAGCC GTGCGAGCTT TTGGTTGAGG GGAAGGACGT GCGTCCCTGC CGATTGATGG GGGAAATGGG GAGTCGATGA
|
Protein sequence | MILTEQNGKT CLRNICFEEL AARYGTPFYL YDLDKVKEKC AAVRKAFGDS LELLYAVKAN PNRELLAAMR GEVDGLDIAS AGELERALET GYDAGCISFA GPGKTRDELR RSLEAGVGCI SVESLRELND LRDLVRAGSH RAYILVRVNP QLLIRDFAVK MGGKASQFGI DEEELPSALD FIKANADAFD FKGIHIYAGT QCLNEEALAQ NLANTLAIAA RITTDYGMEC RVINIGGGLG VSYYEEHPGL DLDKLALLFR AEFDRYREAT GTKPRILLEL GRFLVAEAGI YVTRVVSEKL SRGEQFYVLD GGMNHHLSAS GNLGMTIRKN YLVRNLSRPG AERIICTLVG PLCTPLDLMG KGVTVEVPEV GDLVGFLNSG SYGYSASPLL FLGHGEPCEL LVEGKDVRPC RLMGEMGSR
|
| |