Gene Gmet_2014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_2014 
Symbol 
ID3740671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp2254010 
End bp2254921 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content47% 
IMG OID637779308 
Productglycosyl transferase family protein 
Protein accessionYP_384968 
Protein GI78223221 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.0488163 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAGG TCAGTGTTGT ATTGCCAACG TATAATTGTG GCACGTATGT CGGTGTGGCT 
GTCGAATCTG TTTTGCAACA GACATACAGC AACTATGAGC TGATCATAGT AAATGACGGT
TCAACCGATG AAACAGATCA GGCGCTGGCA CCATACTTAT GCAATAATGG TCATATCCGT
TACATCAAGC AGGGAAACAA GGGGCATGCT GGTGCCAGAA ATACGGGAAT AAGGGCAGCC
ACAGGGGATG TTATCGCATT CATCGATTCC GATGACAAAT GGTTGCCCGA GAAGCTGGGA
GAACAGGTGC AAGCAATGGA AGAGGACCCT GAAGTAGGCC TGGTTCATTG CAACGTTTAC
GGTTTTGGCG AAAACCAGGA AGTGCAAGTG AGGGGGCCAC TGTTGACTCA AGAGCAGCTT
CAGGGGTATT CCGGCTATAT TTTCGATAAC CTGTATTTTA GAAAAATAAT CATAACGACA
ACTACGGTTA TGATCAGAAA GAGTTGCATC GATGATGTAG GTATGTTCGA CGAGAACATG
ACGCGGTACG GATCGGAAGA CAGAGAGTTG TTCCTGCGTA TTCTGTGGAA ATACAAAGCC
AGATACGTAA ACAAGCCTTT GGCCATGTAC CGCAACAGGA GCGATTCAGA AGGCCAGAAC
TATGAAAGGA TGATTAAGGG ACAAGAGTAT GTATATGAGA AGATAACCAG CCTGTATGGA
TTGCCCCAAA GCTCAAAAAG AGCTGTTATG TCGAAGATGT ATCAGGAGTG GGCACGTGAA
TTCTATGCCA AGGGACGCTT TGCTGACGGA CTCACCAATC AGGTCAAGGC AATCAGGGCG
AATCCGATCG ACATGAATGC CTATTTCGCT TTGAAGCGCT ACGCCAGGTT TCTTTTCAGC
AGGGCCACGT AG
 
Protein sequence
MNKVSVVLPT YNCGTYVGVA VESVLQQTYS NYELIIVNDG STDETDQALA PYLCNNGHIR 
YIKQGNKGHA GARNTGIRAA TGDVIAFIDS DDKWLPEKLG EQVQAMEEDP EVGLVHCNVY
GFGENQEVQV RGPLLTQEQL QGYSGYIFDN LYFRKIIITT TTVMIRKSCI DDVGMFDENM
TRYGSEDREL FLRILWKYKA RYVNKPLAMY RNRSDSEGQN YERMIKGQEY VYEKITSLYG
LPQSSKRAVM SKMYQEWARE FYAKGRFADG LTNQVKAIRA NPIDMNAYFA LKRYARFLFS
RAT