| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2012 |
|---|
| Symbol | |
|---|
| ID | 3740669 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | - |
|---|
| Start bp | 2251373 |
|---|
| End bp | 2252824 |
|---|
| Gene Length | 1452 bp |
|---|
| Protein Length | 483 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 637779306 |
|---|
| Product | polysaccharide biosynthesis protein |
|---|
| Protein accession | YP_384966 |
|---|
| Protein GI | 78223219 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 47 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 0.715057 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTAGTT TGAAGAAAAA AACATTCGAG AATGTTGCCT ATATAGGAGT TGCGCGGATT
GTTGCGTTAG TTTTTCAATC AATTGCGAAC ATAATTCTGA GTAGGGCTCT CACCTCAAGC
GACTATGGTT TGGTAGGTTT TGCTACAATT TTTGTGAATT TCTTTTCACA GTTTAGCGAT
TTAGGCTTGA ACAGTGCCGT TGTCCATAGG AAGCAACTTG ATGACACCGC ACTGCACACG
GGTTTCACCA TGAAGCTTGG CATCGGCCTC TTCCTCTATA TAATTGCTTT TTGTGCTTCT
GGTCTGGCGG TATTTTTCTT TGATAACCCT GGTGTTGTTG GTGTAATCAA ACTGTTAGCG
CTCAATTTCA TTATTAATAG TTTTTCTTTT ATACCAACTA CCATGCTTAA GCGTGAACTA
GACTATAAAA AAATTGCATC AGCAACCGTC TGTCAGACAA TGGTCAACTC GTCGCTGGCT
ATGATTTTGG CTCTGGCAGG ATTCAAGTAT TGGAGCATAG TTATTGCTAA TATTTGTGCG
ACTCTTGCAA TGATATTGAC ACTAAACTAT TTGAAACCGG TAAAAATTAA GTTTGCGTTC
GATAGAGAGT CTGCACGCCA GTTCATGAGC TATGGAACAA GTCTTTCGCT GACAGGATTT
ATTGTTTTTA CGATATTTAA CGTTGACAAC TTCATCATTG GTGCAGTTAA GGGCTCTACG
GAGCTTGGCT ATTACATGAT TGCTTTTAAC TGGGGATCTA TCATCTGCGT GATTCTTGGT
ACTGTGGTCA ATAGTGTGCT TTTCCCAACC TTCTCGCGCA TGGAGCAGGA TCGGGGGCGG
ATTAAAAGAT CATATTTTAG AGTTTTGGAG TATGTAAGTT TTGTAGGTAT TTTGGCTAAC
GTTACCCTAC TTCTCATTTC GAGAGATTTT TTGGTCCATG TGCTGGGCCA TGGAACAGAT
AAATGGTTAC CTGCGCTTCA GAGTTTAAGA ATATTGTGCG CTTATGGCAT TGTTCGCTTT
CTACTCGAAC CGTTGGGCAA CGTACTAATG GCCCTTGATA TGAACAAGGT TCTTCTCAAA
ACAACGGCTC TTTCGGCAAT CATTGAAGTC GTCCTTATCT ATCCGATGTT GAAATTTTAT
GGAATAGAGG GTGTTTCGTT GCTAATAACC GCTACTTATC TTGTGCAGTA TGGGATCTAT
TATCCGATAG TTAAAAAAAC CACAGACATA CAATTTAGCG AATTTGTATC AGCAACGAAA
GATGCATTCC TTTCGGCGTC AGTAATTATT GCGCTATCCT TATTTCTTAG AGATTATTTT
TCTGCTGAGT CGGTGATGGG AGTAGTTGCA AAAGTTATAG TAATTGCATT TATTTATTTT
GTACTCCATG GTCTTCTTAA TAAATGGAAG TTGGTTCGTG AAGCGCGTGA AATGCTACTC
GGTGTTAGGT GA
|
|---|
| Protein sequence | MTSLKKKTFE NVAYIGVARI VALVFQSIAN IILSRALTSS DYGLVGFATI FVNFFSQFSD
LGLNSAVVHR KQLDDTALHT GFTMKLGIGL FLYIIAFCAS GLAVFFFDNP GVVGVIKLLA
LNFIINSFSF IPTTMLKREL DYKKIASATV CQTMVNSSLA MILALAGFKY WSIVIANICA
TLAMILTLNY LKPVKIKFAF DRESARQFMS YGTSLSLTGF IVFTIFNVDN FIIGAVKGST
ELGYYMIAFN WGSIICVILG TVVNSVLFPT FSRMEQDRGR IKRSYFRVLE YVSFVGILAN
VTLLLISRDF LVHVLGHGTD KWLPALQSLR ILCAYGIVRF LLEPLGNVLM ALDMNKVLLK
TTALSAIIEV VLIYPMLKFY GIEGVSLLIT ATYLVQYGIY YPIVKKTTDI QFSEFVSATK
DAFLSASVII ALSLFLRDYF SAESVMGVVA KVIVIAFIYF VLHGLLNKWK LVREAREMLL
GVR
|
|---|
| |