Gene Gmet_1992 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_1992 
Symbol 
ID3739864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp2223204 
End bp2224571 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content56% 
IMG OID637779286 
Producttwo component, sigma54 specific, Fis family transcriptional regulator 
Protein accessionYP_384946 
Protein GI78223199 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID[TIGR02915] putative PEP-CTERM system response regulator 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.139659 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAGC TGCTCATAGT TGATGACAAC GAGGATATCC GCCGTCAGCT TCGATGGGGG 
ATTGGGAAGG AGTATTCCCT TCATCTGGCC GCCGATGGCA CAGAGGCGCT GGAACTCTTC
CGCAAGCACC GCCCCCAGGT CGTTACTCTC GACCTGGGGC TCCCTCCCCA TGAGGACAGT
TCAGAAGAGG GGTTTCGCTG CCTCGGTGAG ATGCTTCGCA TTGCCCCCGA CGCAAAGGTG
ATCGTCATTA CCGGTAACGA GGGGAAGGAG AACGCCGTGA AGGCGGTGCA GATGGGGGCC
TATGACTTTT ACCAGAAGCC CATCGATCTG AATGAGCTCA AGGTTATAAT CAAGCGGGCT
TTTCACCTGC AGACCCTTGA GGATGAGAAC CGTCGCCTGC AGAGCGCCCT TGGGGGGAGC
GGCCCGGATG TCAAAGGGAT AATCGGCCAG TGTGCCGAGA TGCAGCAGGT ATTTTCGACG
ATCAGGAAGG TTGCCACCTC TGACATCTCT GTTCTTATCC ACGGCGAGAG TGGCACCGGC
AAGGAGCTTG TGGCTCGCGC CATCCACGCT CAGAGTCTGC GCAAGGACGG CCCGTTCATC
CCCATCAACT GCGGTGCTAT CCCTGAAAAT CTTCTTGAAT CAGAGCTGTT CGGGCATGAG
AAGGGCGCGT TCACTGGAGC AATGGCCCGG GTTCAGGGGA AGGTGGAATA TGCCCACAAG
GGGACACTCT TCCTGGACGA AATCGGTGAG CTTCCCCTCA ACCTCCAGGT CAAGCTCCTT
CGTTTCCTGC AGGAAAAAGC CATTCAACGG GTTGGGGGGA GGGAGGATAT CTCCATTGAC
TCCCGGATCA TAGCGGCCAC CAATGTCGAT ATCGTTCGCG CCATGGAAGA GGGGAGGTTT
CGGGAAGACC TCTATTACCG GATCGGGGTG GTAACCGTCA CGCTTCCTCC CCTCAGGAAC
CGCGGCGATG ATGTTATGCT GTTAGCCAAT TTCTTCCTGA AGCGGTGCGT CAATGAGTTC
AAGAAGAAGA TAAAAGGTTT TAGTGAAACA TCCCGTGAAT ACATCGAAAA TTATGGTTGG
CCGGGGAACG TGCGCGAATT GGAAAACAAG GTTCAGCGGG CAGTGCTCAT GGCATCGGGG
GCAGTAATCG AGCCCGACGA TCTGGGCTTC ACCGAGCGAC CCTCGGCACG AAAAGCAGGC
ATCGGTGAGG TGACGACCCT GCGTGAAGCC AGGGAACAGG TTGAGCGGGA GATGATCAGG
GGGGCTATTA CCAATAGCAA GGGGAATATC GCCAAGGCTG CGGAAGAGTT GGGAATCAGC
AGGCCAACAC TCTATGATCT CATGAGGAAG CACGGCATTA ACGCATGA
 
Protein sequence
MEKLLIVDDN EDIRRQLRWG IGKEYSLHLA ADGTEALELF RKHRPQVVTL DLGLPPHEDS 
SEEGFRCLGE MLRIAPDAKV IVITGNEGKE NAVKAVQMGA YDFYQKPIDL NELKVIIKRA
FHLQTLEDEN RRLQSALGGS GPDVKGIIGQ CAEMQQVFST IRKVATSDIS VLIHGESGTG
KELVARAIHA QSLRKDGPFI PINCGAIPEN LLESELFGHE KGAFTGAMAR VQGKVEYAHK
GTLFLDEIGE LPLNLQVKLL RFLQEKAIQR VGGREDISID SRIIAATNVD IVRAMEEGRF
REDLYYRIGV VTVTLPPLRN RGDDVMLLAN FFLKRCVNEF KKKIKGFSET SREYIENYGW
PGNVRELENK VQRAVLMASG AVIEPDDLGF TERPSARKAG IGEVTTLREA REQVEREMIR
GAITNSKGNI AKAAEELGIS RPTLYDLMRK HGINA