Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_1992 |
Symbol | |
ID | 3739864 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 2223204 |
End bp | 2224571 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637779286 |
Product | two component, sigma54 specific, Fis family transcriptional regulator |
Protein accession | YP_384946 |
Protein GI | 78223199 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | [TIGR02915] putative PEP-CTERM system response regulator |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.139659 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAAGC TGCTCATAGT TGATGACAAC GAGGATATCC GCCGTCAGCT TCGATGGGGG ATTGGGAAGG AGTATTCCCT TCATCTGGCC GCCGATGGCA CAGAGGCGCT GGAACTCTTC CGCAAGCACC GCCCCCAGGT CGTTACTCTC GACCTGGGGC TCCCTCCCCA TGAGGACAGT TCAGAAGAGG GGTTTCGCTG CCTCGGTGAG ATGCTTCGCA TTGCCCCCGA CGCAAAGGTG ATCGTCATTA CCGGTAACGA GGGGAAGGAG AACGCCGTGA AGGCGGTGCA GATGGGGGCC TATGACTTTT ACCAGAAGCC CATCGATCTG AATGAGCTCA AGGTTATAAT CAAGCGGGCT TTTCACCTGC AGACCCTTGA GGATGAGAAC CGTCGCCTGC AGAGCGCCCT TGGGGGGAGC GGCCCGGATG TCAAAGGGAT AATCGGCCAG TGTGCCGAGA TGCAGCAGGT ATTTTCGACG ATCAGGAAGG TTGCCACCTC TGACATCTCT GTTCTTATCC ACGGCGAGAG TGGCACCGGC AAGGAGCTTG TGGCTCGCGC CATCCACGCT CAGAGTCTGC GCAAGGACGG CCCGTTCATC CCCATCAACT GCGGTGCTAT CCCTGAAAAT CTTCTTGAAT CAGAGCTGTT CGGGCATGAG AAGGGCGCGT TCACTGGAGC AATGGCCCGG GTTCAGGGGA AGGTGGAATA TGCCCACAAG GGGACACTCT TCCTGGACGA AATCGGTGAG CTTCCCCTCA ACCTCCAGGT CAAGCTCCTT CGTTTCCTGC AGGAAAAAGC CATTCAACGG GTTGGGGGGA GGGAGGATAT CTCCATTGAC TCCCGGATCA TAGCGGCCAC CAATGTCGAT ATCGTTCGCG CCATGGAAGA GGGGAGGTTT CGGGAAGACC TCTATTACCG GATCGGGGTG GTAACCGTCA CGCTTCCTCC CCTCAGGAAC CGCGGCGATG ATGTTATGCT GTTAGCCAAT TTCTTCCTGA AGCGGTGCGT CAATGAGTTC AAGAAGAAGA TAAAAGGTTT TAGTGAAACA TCCCGTGAAT ACATCGAAAA TTATGGTTGG CCGGGGAACG TGCGCGAATT GGAAAACAAG GTTCAGCGGG CAGTGCTCAT GGCATCGGGG GCAGTAATCG AGCCCGACGA TCTGGGCTTC ACCGAGCGAC CCTCGGCACG AAAAGCAGGC ATCGGTGAGG TGACGACCCT GCGTGAAGCC AGGGAACAGG TTGAGCGGGA GATGATCAGG GGGGCTATTA CCAATAGCAA GGGGAATATC GCCAAGGCTG CGGAAGAGTT GGGAATCAGC AGGCCAACAC TCTATGATCT CATGAGGAAG CACGGCATTA ACGCATGA
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Protein sequence | MEKLLIVDDN EDIRRQLRWG IGKEYSLHLA ADGTEALELF RKHRPQVVTL DLGLPPHEDS SEEGFRCLGE MLRIAPDAKV IVITGNEGKE NAVKAVQMGA YDFYQKPIDL NELKVIIKRA FHLQTLEDEN RRLQSALGGS GPDVKGIIGQ CAEMQQVFST IRKVATSDIS VLIHGESGTG KELVARAIHA QSLRKDGPFI PINCGAIPEN LLESELFGHE KGAFTGAMAR VQGKVEYAHK GTLFLDEIGE LPLNLQVKLL RFLQEKAIQR VGGREDISID SRIIAATNVD IVRAMEEGRF REDLYYRIGV VTVTLPPLRN RGDDVMLLAN FFLKRCVNEF KKKIKGFSET SREYIENYGW PGNVRELENK VQRAVLMASG AVIEPDDLGF TERPSARKAG IGEVTTLREA REQVEREMIR GAITNSKGNI AKAAEELGIS RPTLYDLMRK HGINA
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