Gene Gmet_1981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_1981 
Symbol 
ID3739203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand- 
Start bp2210190 
End bp2210867 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content55% 
IMG OID637779275 
ProductMgtC/SapB transporter 
Protein accessionYP_384935 
Protein GI78223188 
COG category[S] Function unknown 
COG ID[COG1285] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.0166435 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.0845453 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTCA ACCTCTACAT GATTGGCCGT CTTCTCCTGG CATCGCTCCT CGGAGGGCTC 
ATCGGCCTGG AGCGGGAGAT CCACGGGCGT CCGGCCGGTT TCAGGACGCA TCTCCTGGTG 
TCCTTGGGTT CGTGTCTTTT TGTGGTCGCG TCCATCGAAT TTTATCGGCT TTACGGTAAT 
TTTTCCGGTG TCGGCCCACT TGGCGTCGAT CCTGGTCGGG TTGCCGCCCA GGTCGTGACC 
GGTATAGGAT TTTTGGGGGC AGGTGCCATC CTCCGCGAGG GGTCGTCCAT CCGCGGTCTC 
ACCACGGCGG CATGCCTCTG GATTGCTGCA GCCATTGGCC TTTCGTGTGG GGCGGGCCTC 
TACACCGTTT CTCTGGCCGT CACGGCAATT TCACTGATAA CCCTTCTCTG CCTGAAGAGG 
GTCGAAAGTG TTTTGAAGCG TGATTCCTAC TACTCCGTCA AGGTCTGGAG TGATGATATG 
AGGGGATTAT CAGACCGGAT TGAACAGGTC CTGAAGGCTG GGGGACTGGA GATTCTGGAT 
GTTAATGTGG AAAAAGATAT TGATTCCGCA CGCATGTACT TTGAATTTGA TGTGAAGTTC 
AGTACGCGCG GTGCCAAAGG TGCTATCGTG GAATCCCTCG TCTCCGTTGA TGGCGTGAGG 
AAAGTGCGTC TCGATTGA
 
Protein sequence
MEFNLYMIGR LLLASLLGGL IGLEREIHGR PAGFRTHLLV SLGSCLFVVA SIEFYRLYGN 
FSGVGPLGVD PGRVAAQVVT GIGFLGAGAI LREGSSIRGL TTAACLWIAA AIGLSCGAGL 
YTVSLAVTAI SLITLLCLKR VESVLKRDSY YSVKVWSDDM RGLSDRIEQV LKAGGLEILD 
VNVEKDIDSA RMYFEFDVKF STRGAKGAIV ESLVSVDGVR KVRLD