| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1971 |
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| Symbol | |
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| ID | 3740151 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 2201109 |
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| End bp | 2202590 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637779265 |
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| Product | 23S rRNA methyltransferase/RumA |
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| Protein accession | YP_384925 |
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| Protein GI | 78223178 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA
[TIGR02085] 23S rRNA (uracil-5-)-methyltransferase RumB |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.209828 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.0836094 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTACGA GATACAGGAA ACGAGAAGAT AATAGAAACC ATCGGACCGC CACCGGCCAA
ACGGTAACAC TCACCATCAC CGGTTTTGAC GATGAAGGAT TCGGAACGAC ATCCCACGAA
GGGAAAAAAG TCCTCGTGGC AGGTGCCCTC CCTGGTGAAA CGGTCAGCAT CAGGGTAACT
CACAACGGAC CACGGACCAT GTTCGGGGAG GCAATCACCA TACTCTCCCC TTCCCCCGAC
CGCATGGCGT CTCCTTCATG CACCACCTCC GCCTGCAGCA ACTGTCCTCT CATATCCATG
AACTATGGGG CACAGCTTAC CCTGAAACGC AGCCTCGTCG AAAAGGAGAT CCGCTCCTTC
GCCTCGCTGC GCGCAGTCCC CATAGACGAT GTCATTTCCT CTCCCCGCCC CCTACAGTAC
CGAAACTCCG CAAAGCTTGT TGTGGCGGGA ACCTTCAAAT CTCCAATCAT CGGCATCTAT
CGGCGCAACA GCCACAACGT GGTCGATATC AGTGCCTGCC CCCTTCACAA CCCACTCATC
AATCGGGTGG TGGCTGCCGC GAAGGAAGGA ATACGAAAGG GGAAGGTGCC GGTTTACAAT
CCCCGCACCG ACACCGGCAT CCTCCGCTAC CTTGTGGTGA GGGTTTCCGA ACACACTGGC
CGGGCCATGG CCGTCTTCGT CACTGCCCAG AGAAGTTACA ATGAGATTCA CCATCTCGCC
AAGTTCGTAA GGCAGGCGGT CCCGGAACTG GATGTGGCGG TTCAGAACGT GAACACCTCC
GAAGGGAATG TCATCCTCGC CCCCCATGAC CACTTCCTGA CCAAAGACCA TGCCATCATT
GAAGAGCTTG CCGGGATCCG TTTTTCCATC TCGCCCCGCT CGTTTTTCCA GGTGAACAGC
GGCAGCGCCC GCATCATCTA CGAAAAGGTC CGGGAATGGA GCGCCTTGAC CGGCAATGAG
AAGGTCGTTG ATCTCTATTG CGGCATCGGG GGGATTTCAC TCTTCCTGGC CCCCGGCGCA
CAGGAGGTTC ACGGCATAGA GTACGTGGAT GCGGCGGTAG CCGATGCGGA ACGAAACGCG
CGCCTCAACG GGATTCGCAA CTGTTCCTTC GAGGCGGGTG ATGCGGCAGA ACTTCTGGAA
GAGTTGGTGG AAGAAGGGAC TGAACCCGAC GTGGTCATCT TTAACCCGCC ACGCAAGGGG
TGCGATCGCC GGGTGCTTGA GGCTGCCGTT AACTCAGGCC CTGGCCGGAT GATCTATGTC
TCCTGCTCCC CCGCCACCCT GGCCCGCGAC CTCGACATCC TCGCGGGGCT CGGCTACCAG
ACACGGGAGA TCCAGCCCGT GGACATGTTC CCCCAGACTC CTCACATTGA AAATGTGGCT
CTTCTCGTCG ATGCCCGTCA CGCGCGGGAT GACCACGGAA AAACAACGTC CCCCCAAGGT
CGGCAACATT TCACGCACAA AAGAAGAGGG GCATCCGCCT GA
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| Protein sequence | MTTRYRKRED NRNHRTATGQ TVTLTITGFD DEGFGTTSHE GKKVLVAGAL PGETVSIRVT
HNGPRTMFGE AITILSPSPD RMASPSCTTS ACSNCPLISM NYGAQLTLKR SLVEKEIRSF
ASLRAVPIDD VISSPRPLQY RNSAKLVVAG TFKSPIIGIY RRNSHNVVDI SACPLHNPLI
NRVVAAAKEG IRKGKVPVYN PRTDTGILRY LVVRVSEHTG RAMAVFVTAQ RSYNEIHHLA
KFVRQAVPEL DVAVQNVNTS EGNVILAPHD HFLTKDHAII EELAGIRFSI SPRSFFQVNS
GSARIIYEKV REWSALTGNE KVVDLYCGIG GISLFLAPGA QEVHGIEYVD AAVADAERNA
RLNGIRNCSF EAGDAAELLE ELVEEGTEPD VVIFNPPRKG CDRRVLEAAV NSGPGRMIYV
SCSPATLARD LDILAGLGYQ TREIQPVDMF PQTPHIENVA LLVDARHARD DHGKTTSPQG
RQHFTHKRRG ASA
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