| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1970 |
|---|
| Symbol | |
|---|
| ID | 3740150 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 2199634 |
|---|
| End bp | 2201004 |
|---|
| Gene Length | 1371 bp |
|---|
| Protein Length | 456 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 637779264 |
|---|
| Product | transmembrane protein |
|---|
| Protein accession | YP_384924 |
|---|
| Protein GI | 78223177 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4267] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.233998 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 0.0408666 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGGCA TCGGCTTCGA ACTGCGCAAA CTGCTCAAAC GCGACACCTT TTTTTCACTG
CTGCAGACCT ATGGCTATGC CGGGATTATC AGCTCCGGCC CCTGGGTGCT CTCCATCTTC
GCAGTGATGT TGATTGGCTT CATTTCGCTG CCGGTCGTCA TCCCGCCAGT TCTGGTATCG
CAGTTCCAGA CATCCATCAC GTACCTGATC GCCCTTTCCC TGATCTATAC GGGCTTGTTC
CAACTGGCCT TCACCCGCTA TTCGGCCGAC AGAATCTTTG AAAAGGAACA CTTCAGACTG
CTTCCCAATC TGAACGGCCT GCTCCTCTTG GTGACCACTG TCGGAGGTCT GGTTTCCTTC
CCCCTGGCCA TCGTGCTGTT CCCCCAGACA TCGCTGATCT ACCGCCTTCT CTTCGCAACC
ACCTTTGTTA CGGTCTCCTG CGTCTGGATG GCCGCCATTC TTCTTTCAGG CCTGAAAGCC
TACAAGACAA TACTGTATAA TTTCGCCCTC GGCTATGGTA CCGCGCTGTT TCTTGCTTTT
TTCCTGCGGA CCTGGAAGCT GGAAGGACTG TTGCTGGCAT TCCTGACCGG CCAGTTTGTG
CTCCTCAAAG GGATGCTGTT TGTAATTTTC CGCAACTACC CGTCACGCAC CTTCGTGGAG
TTCGATTTTC TGCGCAAGCG GCGAGTGCAT TACTCCCTGA TGCTTACCGG CTTCTTCTAC
AACCTGGCGA TTTGGGCCGA TAAATTTGTT TTCTGGTTTC ACCCCTATAC CGGCAGCAAC
GTGATCGGCC CCCTGCACGC TTCGGAAATA TATGATTTTC CGATATTCCT CGCCTATCTT
TCAATTCTGC CCGGCATGGC CGTGTTCCTG GTGCGGATGG AAACCGATTT CGTCGAGTAT
TATGATCGGT TCTATGATTC GGTTCGCGAA GGGGGATCAC TGACCACCAT ACAGGCTATG
AAGAATGAAA TGGTACACAC GGCACGGGAA GGGATCTACG ACATCATCAA GGTCCAGTCC
ATCGCCACCA TCATCATATT CCTCTTTGGC CCCGCCATGC TCTCCCTGGC GGGAATCTCG
CTGGTTTACG TGCCGTTGCT TAACATCGAC GTGGTTTCTA CCGGTCTGCA GGTGGTTCTG
CTGGGGCTCA TCAACATCTA TTTCTATCTT GACCGGCGAG AACGCGCCCT GCTCCTGACA
GTACTGTTTG CCACCCTGAA TTTCATTCTA TCAATCATAT CCATCAACCT CGGCCCGTAC
TTTTACGGCT ATGGTTTTGC CGGTTCGCTG TGCATAACGA TCATGTGCGG CATGTTCCTG
CTGGACCGGG ATCTGGACAC ATTGGAGTAC AAGACCTTCA TGCTGCAATA G
|
|---|
| Protein sequence | MAGIGFELRK LLKRDTFFSL LQTYGYAGII SSGPWVLSIF AVMLIGFISL PVVIPPVLVS
QFQTSITYLI ALSLIYTGLF QLAFTRYSAD RIFEKEHFRL LPNLNGLLLL VTTVGGLVSF
PLAIVLFPQT SLIYRLLFAT TFVTVSCVWM AAILLSGLKA YKTILYNFAL GYGTALFLAF
FLRTWKLEGL LLAFLTGQFV LLKGMLFVIF RNYPSRTFVE FDFLRKRRVH YSLMLTGFFY
NLAIWADKFV FWFHPYTGSN VIGPLHASEI YDFPIFLAYL SILPGMAVFL VRMETDFVEY
YDRFYDSVRE GGSLTTIQAM KNEMVHTARE GIYDIIKVQS IATIIIFLFG PAMLSLAGIS
LVYVPLLNID VVSTGLQVVL LGLINIYFYL DRRERALLLT VLFATLNFIL SIISINLGPY
FYGYGFAGSL CITIMCGMFL LDRDLDTLEY KTFMLQ
|
|---|
| |