Gene Gmet_1967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_1967 
Symbol 
ID3740147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp2195749 
End bp2197128 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content57% 
IMG OID637779261 
Producttransmembrane protein 
Protein accessionYP_384921 
Protein GI78223174 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value0.240194 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTCA ACAAAGACAG CACCATGATA CTTGACAGGT GGCTGGAGAC CTTTGCCATC 
ACCGCCATCG CGGTAACGGG AGGGTTTCTC CTCAACAGCA GCGACCCATT ATTCGTGCAT
GCCCGATTCC CATGGGTCTG GTTCGGGCCA CTGCTGATTG CCCTGCGCTA TGGCATCGCT
CCGGGACTCG TCTCGACAGG GGGAATCTGT CTGGCGCTCC TGGTCATGCC CCGCTTCGGT
CTTCCGATTG GTGAGTTTCC CACCAACTAC GTGCTGGGTG GCCTGCTCAT GGTTTTGATA
ACAGGACAGT TCAGCGATAT CTGGAGCAAG CGCCTAAGAC ACGCCAACCA GCTGAGCAAC
CATACGAGTG AGCGCTTCGA GCAACTGTCC CGAGCCTACT TCATGGTCCG TCTGTCCCAT
GACAGACTGG AACAGAACCT GATCAGCCGG CCAGTCACGC TGCGGGATGC CATGATTAAC
CTTCGCAATC TGCTGGCAAA ACATGACGGG AGGATGGACA GTGAAACCAG CGCAGCCCTC
CTCTCGATCC TCATGCATTA CTGCAGCCTG GAAAGCGCCG CCATCTATCC GGCAAACGAT
GACGGCGAAC TACTGGATGT TCCCATTGCC AAGTGCGGCA AGGGCGCACC GCTGAATAGA
GACGACCTGC TGCTCCGCTC GGCCATCGAG TCAGGCTATT CCGCCTACCA GGCCATAAAC
CGGCATATCG TTGAGGGGCG GCCTTCAGCG CCGTCAGCAC TCTCGTCGGC GGTCTGGAGT
GTGGACGTAT CACGCGACGA ATCGAAGGAG CAGACGTCCT ATCTGGTTGT CGCACCAATG
CGCACCAGTT CGGGCAAACT GCTCGGTTTG CTGCTGGTCA CGGAAATGCC TTTCCTCAAC
CTGCATCGCG AAACACTGCA GATAATGGGT GTTCTGTTGG CCTATTCCTC CGATCAGGCA
GAATCCGTCG AGCGGGCCAG GGATATACTG GGTCTCTTTC CGGACTGCCC CCCCAATTTT
GCCGCTGAGC TGATCAAGAC CGTTCGTCTT AAGCGTGACC TTCATGTAAG CAGCGCCCTG
GTGATGGTAC AAGTCATGGC CGACTCCCGT CTGGACGAGA TATGCAAAAC CATGGAGCGA
CAGCAACGGG GCCTGGATCA CTCGTGGCTG AGAACAACGG ACTGGGGGGC ACAGTTCGTT
ACCCTGATGC CTTTTTCAGG GCCGGCCTCC ATTGAAGGGT ATAAGTCGCG CATTCATGAA
ATACTGCAGC GCCAGGTTGG CAGAAGTACC GGGCAAGAAG GCATCACCAT GCACTCCACG
AGTGTGACAA CCGATGATCC CCTTGTTCAA CTGGTTGCCC TGCTGGAGGA GAAGCAATGA
 
Protein sequence
MAFNKDSTMI LDRWLETFAI TAIAVTGGFL LNSSDPLFVH ARFPWVWFGP LLIALRYGIA 
PGLVSTGGIC LALLVMPRFG LPIGEFPTNY VLGGLLMVLI TGQFSDIWSK RLRHANQLSN
HTSERFEQLS RAYFMVRLSH DRLEQNLISR PVTLRDAMIN LRNLLAKHDG RMDSETSAAL
LSILMHYCSL ESAAIYPAND DGELLDVPIA KCGKGAPLNR DDLLLRSAIE SGYSAYQAIN
RHIVEGRPSA PSALSSAVWS VDVSRDESKE QTSYLVVAPM RTSSGKLLGL LLVTEMPFLN
LHRETLQIMG VLLAYSSDQA ESVERARDIL GLFPDCPPNF AAELIKTVRL KRDLHVSSAL
VMVQVMADSR LDEICKTMER QQRGLDHSWL RTTDWGAQFV TLMPFSGPAS IEGYKSRIHE
ILQRQVGRST GQEGITMHST SVTTDDPLVQ LVALLEEKQ