Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_1961 |
Symbol | |
ID | 3740141 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 2185921 |
End bp | 2186601 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637779255 |
Product | peptidase M50 |
Protein accession | YP_384915 |
Protein GI | 78223168 |
COG category | [R] General function prediction only |
COG ID | [COG1994] Zn-dependent proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0000000000652923 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACAGT TTTTCCTCAA GTTTTCGATC ATGCTTGTAC CCGCCCTCAT GGCGATCACC TGCCACGAGG TATCCCACGG CTTCGTGGCC GACCGCTTGG GCGACCGGAC GGCACGCTTC ATGGGACGGC TCACTCTCAA CCCCCTCAAG CATCTGGACA TCCTGGGCAC CCTCATGATC TTTCTTGTCG GCATCGGATG GGCCAAGCCG GTGCCGGTCA ATTTTCACAA CCTGAGAAAC CCCAAGCGGG ACATGATCTG GGTCGCCGGT GCCGGCCCGG TGACAAATTT TGTTCTTGCT CTATTCTCGG CCCTGATTAT GCGAGGGCTC GCTGCCCTAG GCGCAGGGTT TCCCGACGGT TCCCATGCTC TAACGTTTCT TGACCCGCTG ATTCTGATGA CGGCCTTTTC GGTCTACATC AACCTGCTTC TCTGCATCTT CAACCTGATC CCGGTTCCTC CTCTTGACGG CGGACGGGTG GCAGTGGGTT TGCTCCCCTA TCGTCAGGCG GAGATGCTGG CGCGGGTGGA GCCCTACGGC ATGATCATCA TTATCCTGCT GGTCTTTTTT ACCAATATCT TCAGCTCGGT CATCTCACCG ATCCTCGATA TGGGGATCCG TATTCTTGCC GGGCCTCAAA GCGGTCTGGT GTACAGCGTT ACCCACTTTC TCATGAGATA A
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Protein sequence | MEQFFLKFSI MLVPALMAIT CHEVSHGFVA DRLGDRTARF MGRLTLNPLK HLDILGTLMI FLVGIGWAKP VPVNFHNLRN PKRDMIWVAG AGPVTNFVLA LFSALIMRGL AALGAGFPDG SHALTFLDPL ILMTAFSVYI NLLLCIFNLI PVPPLDGGRV AVGLLPYRQA EMLARVEPYG MIIIILLVFF TNIFSSVISP ILDMGIRILA GPQSGLVYSV THFLMR
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