Gene Gmet_1961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_1961 
Symbol 
ID3740141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp2185921 
End bp2186601 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content56% 
IMG OID637779255 
Productpeptidase M50 
Protein accessionYP_384915 
Protein GI78223168 
COG category[R] General function prediction only 
COG ID[COG1994] Zn-dependent proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000652923 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACAGT TTTTCCTCAA GTTTTCGATC ATGCTTGTAC CCGCCCTCAT GGCGATCACC 
TGCCACGAGG TATCCCACGG CTTCGTGGCC GACCGCTTGG GCGACCGGAC GGCACGCTTC
ATGGGACGGC TCACTCTCAA CCCCCTCAAG CATCTGGACA TCCTGGGCAC CCTCATGATC
TTTCTTGTCG GCATCGGATG GGCCAAGCCG GTGCCGGTCA ATTTTCACAA CCTGAGAAAC
CCCAAGCGGG ACATGATCTG GGTCGCCGGT GCCGGCCCGG TGACAAATTT TGTTCTTGCT
CTATTCTCGG CCCTGATTAT GCGAGGGCTC GCTGCCCTAG GCGCAGGGTT TCCCGACGGT
TCCCATGCTC TAACGTTTCT TGACCCGCTG ATTCTGATGA CGGCCTTTTC GGTCTACATC
AACCTGCTTC TCTGCATCTT CAACCTGATC CCGGTTCCTC CTCTTGACGG CGGACGGGTG
GCAGTGGGTT TGCTCCCCTA TCGTCAGGCG GAGATGCTGG CGCGGGTGGA GCCCTACGGC
ATGATCATCA TTATCCTGCT GGTCTTTTTT ACCAATATCT TCAGCTCGGT CATCTCACCG
ATCCTCGATA TGGGGATCCG TATTCTTGCC GGGCCTCAAA GCGGTCTGGT GTACAGCGTT
ACCCACTTTC TCATGAGATA A
 
Protein sequence
MEQFFLKFSI MLVPALMAIT CHEVSHGFVA DRLGDRTARF MGRLTLNPLK HLDILGTLMI 
FLVGIGWAKP VPVNFHNLRN PKRDMIWVAG AGPVTNFVLA LFSALIMRGL AALGAGFPDG
SHALTFLDPL ILMTAFSVYI NLLLCIFNLI PVPPLDGGRV AVGLLPYRQA EMLARVEPYG
MIIIILLVFF TNIFSSVISP ILDMGIRILA GPQSGLVYSV THFLMR