| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1953 |
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| Symbol | |
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| ID | 3740133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 2179681 |
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| End bp | 2180292 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637779247 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_384907 |
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| Protein GI | 78223160 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000000000000518233 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAAAG TTGCCAGTAT TCTGGCTCTT GCCCTCTTGC TCCTGGGGGG AGTGGGGTAC
TTTGACGCCA ACGCAGACAT TTACCGGTAC GAAGATGAAG AGGGGGTCGT TCATTTTACC
GACGCCCCCA CCGATAAACG GTTCAAGATT TTCATGAGGG ATATCAAGCG GGACCGGAAG
CTTCGCACCA CGTTTAAGCT TGCACGCTTT ACCCGTGACC CTGCCGAATT CGAGCCGATC
ATCACCCAGT GCGCCCAGGA ATTCGGCGTT GACAGATCGC TGGTGAAGGC TGTAATCCAT
GCCGAATCGG GATACAACCC CAATGCCGTC TCCCCCAAGG GGGCAAGTGG GCTCATGCAG
CTCATGCCCA AGACGGCCCG GGATCTGAAA GTGGCTAACA GCCTCGACCC GCGGGAGAAC
ATTCGCGGTG GTGTCCGCTA CCTTCGCTTC CTGCTCGATA CGTTCCGGGG TGATGAGAGC
TTGGCCCTGG CAGCCTATAA TGCCGGACTT TCACGGGTAG CCCAGTATAA CGGCATTCCC
CCTTATCAGG AAACGCGCAC CTATGTCGAC AGGGTGCTTA CTTACAGAAA ATCCTACCAG
ACCACCAATT GA
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| Protein sequence | MPKVASILAL ALLLLGGVGY FDANADIYRY EDEEGVVHFT DAPTDKRFKI FMRDIKRDRK
LRTTFKLARF TRDPAEFEPI ITQCAQEFGV DRSLVKAVIH AESGYNPNAV SPKGASGLMQ
LMPKTARDLK VANSLDPREN IRGGVRYLRF LLDTFRGDES LALAAYNAGL SRVAQYNGIP
PYQETRTYVD RVLTYRKSYQ TTN
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