| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1946 |
|---|
| Symbol | |
|---|
| ID | 3741597 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 2174289 |
|---|
| End bp | 2175284 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637779238 |
|---|
| Product | glyceraldehyde-3-phosphate dehydrogenase |
|---|
| Protein accession | YP_384900 |
|---|
| Protein GI | 78223153 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0000000000229546 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 65 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCTAA GGGTTGCAAT CAACGGCTTC GGTAGAATCG GGCGTTCCGT ACTCCGTGCG
GCAATCAAGG AGAAAGGTAT CGAGTTTGTC GCCATCAACG ACCTCACCGA TGCCAAGACC
CTAGCACACC TGCTCAAGTA TGACTCTGTT CACGGACCGT TTCCCGGCAA AGTCGAAGCC
GGCAATGGTG AAATCATAGT CAACGGCAAA CCGATCAAGA TCCTTGCCGT AAGGAATCCT
GAGGAACTCC CCTGGAAGAA GGAAAAGATC GACGTGGTCC TCGAGTCAAC CGGTCTGTTC
ACCTCCCGTG AAAAGGCCGA ACTTCACCTG AAAGCAGGCG CAAAAAAAAT TATCATCTCC
GCTCCTGCCA CCAACGAGGA CATCACCATC GTCATGGGTG TCAACAGCAA CCTCTATGAC
CCCAAGAAGC ACAACATCAT CTCAAATGCT TCCTGCACCA CCAACTGCCT GGCGCCGGTT
GCCAAGGTGT TGCACGAAAC CTTCGGCATC GAAAAAGGCC TGGTGACGAC GGTTCACTCC
TACACCAACG ACCAGCAGAT CCTTGACCTT CCCCATAAAG ACCTGCGCCG GGCCCGCGCG
GCCGCCATGT CCATGATTCC GACCTCCACT GGCGCTGCCA AGGCAGTCGC CCTTGTGCTG
CCCGAGTTGA AGGGGAAACT GGATGGCATG GCAATTCGCG TCCCGACCCC CAACGTCTCG
GTCGTTGACC TCGTTGTTAC CCTTTCCAAG AAGGCAGATG CCGACAAAGT AAACGCGGCC
CTGAAAAAGG CCTCCAAGGG TTCCCTCAAG GGTGTTCTGG GCTTTTCGGA GGAACCTCTC
GTCTCCATCG ACTTCAATGG CAATCCCCTC TCCTCCATCG TTGATGCCGG CTGCACCAAG
GTGATCGAGG GGAACATGGT CAAGGTTCTT TCCTGGTATG ACAACGAAAC AGGCTTCTCC
CACCGCGTCG TTGATCTCAT GAAACTCATC GCATAA
|
|---|
| Protein sequence | MALRVAINGF GRIGRSVLRA AIKEKGIEFV AINDLTDAKT LAHLLKYDSV HGPFPGKVEA
GNGEIIVNGK PIKILAVRNP EELPWKKEKI DVVLESTGLF TSREKAELHL KAGAKKIIIS
APATNEDITI VMGVNSNLYD PKKHNIISNA SCTTNCLAPV AKVLHETFGI EKGLVTTVHS
YTNDQQILDL PHKDLRRARA AAMSMIPTST GAAKAVALVL PELKGKLDGM AIRVPTPNVS
VVDLVVTLSK KADADKVNAA LKKASKGSLK GVLGFSEEPL VSIDFNGNPL SSIVDAGCTK
VIEGNMVKVL SWYDNETGFS HRVVDLMKLI A
|
|---|
| |