| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1945 |
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| Symbol | |
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| ID | 3741596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 2171991 |
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| End bp | 2174063 |
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| Gene Length | 2073 bp |
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| Protein Length | 690 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637779237 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_384899 |
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| Protein GI | 78223152 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5002] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00000961188 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA CTCTAGAAAA AAGAATAATC ATCTTCGCCT TCATTATTCT TTTTCTCACG
ATTGCCGCAA ATTCAGGTAT GGATATCGTG GGGTTCAGAA GAGACTACAT TCAGGCCCTT
ATCATGAGGT CTCAAAGCCT CGGTTCATCT CTGCGGGCGA ATTTGGAAAA GGTGGTGGGG
CTCGGTATCG ATGTCAAAGA CATCGAGGGA TTGAATGATA AATGTCGCGA AGTTGTCGCA
TCGAGCCCTG AAGTTGCCTA CTGTATTATT ACTGACAGTG AGGGGAATAT CCTTCACCTG
AACGATCCTG TCTACCGGAA CATCCGTTTC GATATTATTC GAAGGGCATT TACAACCCGC
CTCGATCAGA ACATCCACCT CATCGGTGAC GACGGTTCCT ACTACGATAC CGTTACGCCG
GTTCGCTCCC CTGACGGAAA GCAAGTCGCC CTCATACACA TTGGTTTTTC GGTACATGTC
GTGTCCGCGA AGGTGCAGGT GATAATCATT CGTTCGCTAC TCCTTCTTGC GGTTGTCTTC
CTGGTCTCAT TTTCGTTGGT GGTGATTTTT GTCAAGCGAA ACATCGGCCA GCCCATTGCT
GCTCTTCTGG CTGGTGTCAG GAAGGTATCG GAAGGAGAGT TCAATCACCG GATTAATCAA
TTGCCTGTTT ATGAATTCAA TGAATTGGCC AGCAGCGTGA ATCTCATGTC TGATACCCTC
AAGAATCGCG AAGAGGAGAT ACGGAGCAAT TATCAGGAAC TGGAAAATAT CCACAACGAC
CTTCATTCCT CGTATCTCAA GCTGGAGAGC CTGAGCCTCG ACCTGGAAAA ATCGGAGGAA
CTCTACAAAT CGCTTCTCGA AGATGCAAGT GATGCCATTG TCGTCACTGA CGAAAACGAC
ATGGTCAAGA TGGTCAACAA AATGGCTGAA GACTTCTTTG GCCATGATGC GGCCGAACTT
GTCGGATTAT CCCTTAGTCG TATGCTCACG CTGGTGGGAA CCCAGAATTC CTCGATTGTC
TACAATTTTT TTCAGGTGGC GGGGACTGGT AAGCATGTGG CGGAAGAAAT TAAGTTCCTC
AGGAAGGACA AAGAATTAGT GGTTGGTCTC ATTCACGCCA ACATCGTCAC CATTGGTGCA
GAACGGCTGA TTCAGGCCAT CATCCGTGAC GTCACCCGTG AGCGAGAAAT TCTGCTGAAC
CTTGAGAAGA GTGCAGCCGA CTTGGCACGC CTTAATAAGA TGAAGGATTC GTTCCTCGGC
ATAGCATCCC ACGAACTCAA GACTCCCCTC ACGGTTATCA TGGGGTATGC GGAGCTTATC
CTGACGGACC CGCCTTGCCA GGTCGATCCC AATATCATCG ACATGGTGAA CAACATTGCC
GGTGCCGCTA ACCGACTCGA CAACATCGTC AAGGACATGG TCGACGTCTC GATGATCGAC
GAGAAACGGT TGCAGTTGAA ACTCAGCGAG GTTGATGTGA ACCGGTTGGT GGAGGATTCC
CTGAATGAAC TCCGCTTTTT TGTGTCCATG CGCAAGCAAC AATTGGTTTT TGAGCTTGAT
GATGCTATTC CGGCCATCAA GGGGGACACG GTTCGACTCA TGCAACTCCT TTCGAATGTG
ATCGGCAATG CCATCAAGTT CACTCCCGAT GGAGGACGGA TTATGGTTTC CACGCGAGCC
AAGTATATTT TGCGCTCCAA GCAGATTCCA ACGGTGGATC CGGTCCAGTC GCTGGTCAAT
ATCGGCAAGG ACCAGCATCT CTATGTGGAG ATAACCGTGG CCGACACGGG GATTGGTATC
GACATCGACG ACCAGCTCAG AATATTTGAC AAGTTCTATG AAGCGGGAAA TATCGAGGAA
CACTCCTCGG GAAAAGTTGC CTTCAAGTCG CGTGGGGCCG GCCTCGGTCT TTCGATCTCC
AAGGGAATAG TAGAAATGCA TGGCGGTGAA ATCTGGGTCG AATCGCCCGG CTACAACCCC
GACCAATTTC CCGGCTCCAC CTTTCACATC GTACTCCCCC TCAACCCCAT AACCGGTGAC
GGGACCATCG ATTATCTCAA CCTTCTCAAG TAG
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| Protein sequence | MKKTLEKRII IFAFIILFLT IAANSGMDIV GFRRDYIQAL IMRSQSLGSS LRANLEKVVG
LGIDVKDIEG LNDKCREVVA SSPEVAYCII TDSEGNILHL NDPVYRNIRF DIIRRAFTTR
LDQNIHLIGD DGSYYDTVTP VRSPDGKQVA LIHIGFSVHV VSAKVQVIII RSLLLLAVVF
LVSFSLVVIF VKRNIGQPIA ALLAGVRKVS EGEFNHRINQ LPVYEFNELA SSVNLMSDTL
KNREEEIRSN YQELENIHND LHSSYLKLES LSLDLEKSEE LYKSLLEDAS DAIVVTDEND
MVKMVNKMAE DFFGHDAAEL VGLSLSRMLT LVGTQNSSIV YNFFQVAGTG KHVAEEIKFL
RKDKELVVGL IHANIVTIGA ERLIQAIIRD VTREREILLN LEKSAADLAR LNKMKDSFLG
IASHELKTPL TVIMGYAELI LTDPPCQVDP NIIDMVNNIA GAANRLDNIV KDMVDVSMID
EKRLQLKLSE VDVNRLVEDS LNELRFFVSM RKQQLVFELD DAIPAIKGDT VRLMQLLSNV
IGNAIKFTPD GGRIMVSTRA KYILRSKQIP TVDPVQSLVN IGKDQHLYVE ITVADTGIGI
DIDDQLRIFD KFYEAGNIEE HSSGKVAFKS RGAGLGLSIS KGIVEMHGGE IWVESPGYNP
DQFPGSTFHI VLPLNPITGD GTIDYLNLLK
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