| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1943 |
|---|
| Symbol | |
|---|
| ID | 3741594 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | - |
|---|
| Start bp | 2169723 |
|---|
| End bp | 2171018 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637779235 |
|---|
| Product | adenylosuccinate lyase |
|---|
| Protein accession | YP_384897 |
|---|
| Protein GI | 78223150 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0015] Adenylosuccinate lyase |
|---|
| TIGRFAM ID | [TIGR00928] adenylosuccinate lyase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 67 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCGAAC GCTACAGTCG TCCTGAAATG ACCCGCATCT GGGAAGCGCG CAACCGTTAT
CAGAAATGGC TCGACATAGA AATCTTCGCT TGTGAGGCCC ATGCCGAACT GGGCAATATC
CCCCGTGAGG CCGTCGAGCG GATCAAGGCC AAGGCCGACT TCGACGTTGA GCGGATCGAC
GAGATCGAGC GAACCGTCAA GCACGACGTC ATTGCTTTCC TCACCTCCGT CGCCGACTAC
ATCGGCGACG ATTCCCGCTT CGTGCACCTG GGTCTTACCT CCTCCGACGT TCTCGATACC
TCCTTTGCCA TGCTCCTGGC CGAGGCTTCC GACCTCATCA TTGATGACAT CAAGCGCCTC
ATGGAGGTGA TCAAGCGCCG GGCCTTCGAG CACAGGGATA CGCCCATGAT GGGACGTTCC
CACGGCATCC ACGCCGAACC GGTTACCTTC GGCATCAAGA TGGCGCTCTG GTACGACGAG
ATGCGGCGCA ACCTCCGCCG GATGGAGTCT GCCCGCGAAA CCATCGCCTA CGGAAAGATT
TCCGGTGCGG TCGGTACCTT TGCCAATATT GATCCGCGGG TAGAGGAATA CGTCTGCAAG
AAGGGAGGCC TCAAGCCTGC TCCCTGCTCG ACCCAGGTGA TCCAGCGGGA CCGCCATGCC
GAGTTCTTCT CGGCCCTAGC CATCATTGCC AGCTCCATCG AAAAATTCGC TGTTGAGATC
CGCCATCTCC AGCGTACCGA AGTCCTGGAG GCGGAGGAAT ACTTCAGCAA GGGGCAGAAA
GGCTCCTCGG CAATGCCCCA CAAGCGCAAC CCCGTCCTTT CCGAGAACCT CACCGGCCTG
GCCCGCCTCA TACGGGGCTA CGCGGTTTCG GCCATGGAGA ACGTGCCGCT CTGGCACGAG
AGAGACATCT CCCACTCGTC GGTGGAGCGG GTCATCGGTC CCGATGCCAC CATCGTCATG
GATTTCATGC TCAACCGCTG CATCGGCCTC ATCGACAACC TTGTCGTCTA CCCCGAGAAC
ATGATGCGTA ACCTCAACCT CATGCGGGGG CTCATCTTCT CCCAGCGGGT GCTTCTGAAG
TTGGCCAATG CGGGCGCATC CCGCGAGAAG GCCTATGAGC TTGTCCAGCG CAACGCCATG
AAGGTCTGGG AGCAGGGGAA GGATTTCCAG GAAGAACTTC TGGCCGATGC CGACGTGCGT
GGCTTTCTTC CCGAGGAGGA AATCCGCGAG GCCTTTGACC TCAACTATCA CCTGAAGCAT
GTGGGCACCA TCTTCACGAG GGTCTTTGGT GGATAA
|
|---|
| Protein sequence | MIERYSRPEM TRIWEARNRY QKWLDIEIFA CEAHAELGNI PREAVERIKA KADFDVERID
EIERTVKHDV IAFLTSVADY IGDDSRFVHL GLTSSDVLDT SFAMLLAEAS DLIIDDIKRL
MEVIKRRAFE HRDTPMMGRS HGIHAEPVTF GIKMALWYDE MRRNLRRMES ARETIAYGKI
SGAVGTFANI DPRVEEYVCK KGGLKPAPCS TQVIQRDRHA EFFSALAIIA SSIEKFAVEI
RHLQRTEVLE AEEYFSKGQK GSSAMPHKRN PVLSENLTGL ARLIRGYAVS AMENVPLWHE
RDISHSSVER VIGPDATIVM DFMLNRCIGL IDNLVVYPEN MMRNLNLMRG LIFSQRVLLK
LANAGASREK AYELVQRNAM KVWEQGKDFQ EELLADADVR GFLPEEEIRE AFDLNYHLKH
VGTIFTRVFG G
|
|---|
| |