| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1911 |
|---|
| Symbol | |
|---|
| ID | 3740315 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | - |
|---|
| Start bp | 2131606 |
|---|
| End bp | 2132304 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637779203 |
|---|
| Product | ribonucleotide reductase large subunit |
|---|
| Protein accession | YP_384865 |
|---|
| Protein GI | 78223118 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 0.515081 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.000000262265 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGAACTCT CGGAAAATGC GCTAAAGGTT TTGAAGGCCC GCTACCTGCT GAAGGATGAA
AACGGGCAGA TTATAGAAAC GCCAGAGGAG ATGTTCGAGC GGATCGCCCG AACCGTCGCC
AACACTGAAA AGCTCTATGA CGGTGATACC GCCCAGTGGG AAGAGCGTTT TTTCACTCTT
CTCTCGTCCC TGAGATTCCT CCCCAACTCC TCTGCACTCA TGAACGCCGG CAAGCCGATG
GGGCAGCTAG CCGCCTGCTT CGTTCTTCCT TTGGAAGATT CCATGCAGAG CATCTTCGAT
ACCCTGAAGA ACGCTGCGTT GATCCTCCAG AGCGGTGGCG GCACCGGCTT TTCCTTTTCC
CGGCTTCGCC CCAGGGCTGA TATTGTCCGC TCAACCGGCG GCATTGCCAG CGGCCCGGTT
TCCTTCATGA AGATATTCAA TACGGCCACC GACATCATCA AGCAGGGAGG AGCGCGGCGG
GGCGCGAACA TGGGGATACT CCACATCGAT CACCCCGACA TCCTGGAGTT CATCCGGGTG
AAACGGAATG TTCAGGAGCT GGCCAACTTC AACATTTCCG TGGCGGTTAC CGATGCCTTC
ATGGAGGCGC TCCACGCAAA AGGGGAATAC CAGATCGTCA ACCCACGTTC AGGCAAGATA
GTTGGCACCT CAAGGCCGAC GAGGTTTTCG ATGAAATAG
|
|---|
| Protein sequence | MELSENALKV LKARYLLKDE NGQIIETPEE MFERIARTVA NTEKLYDGDT AQWEERFFTL
LSSLRFLPNS SALMNAGKPM GQLAACFVLP LEDSMQSIFD TLKNAALILQ SGGGTGFSFS
RLRPRADIVR STGGIASGPV SFMKIFNTAT DIIKQGGARR GANMGILHID HPDILEFIRV
KRNVQELANF NISVAVTDAF MEALHAKGEY QIVNPRSGKI VGTSRPTRFS MK
|
|---|
| |