Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_1894 |
Symbol | |
ID | 3739171 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 2113008 |
End bp | 2116190 |
Gene Length | 3183 bp |
Protein Length | 1060 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637779186 |
Product | exodeoxyribonuclease V, RecC subunit |
Protein accession | YP_384848 |
Protein GI | 78223101 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1330] Exonuclease V gamma subunit |
TIGRFAM ID | [TIGR01450] exodeoxyribonuclease V, gamma subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0000000000000164621 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCCCCTTT TCCTCTACTC CAGCAACCGG ATGGAGCACC TTGTCGACCG GCTTGTCGAG GTGTTGCGGC GCCCCTTGGC CGCCCCCCTG GCGCCGGAGG TGATCGTTGT CCAGAGCAAG GGGATGCAGC GCTGGCTCTC CATGGAGCTG GCAACGGCAA CCGGCGTCTG GGCCAACGGT GCCTATCCGT TCCCCAATGC CTTTGTCTGG GACCTGTTCC GGAAGGCCCT GCCGGATCTC CCCGCCGCAT CCCCCTTCGA CCCGGCGGTG CTGTCGTGGC GGATCATGGG GCTGCTCTCC GGTTTCCTGG ACCAGCCGGC TTTTGCACCC CTGGCGGGAT ACCTGGCAGG GGAGGAGCGG GAGCTGAAGC TCTACCAGCT TGCCGGGAAG ATCGCCGACA CCTTCGATCA GTACACGATC TTCCGTCCCG ACATGATCGC CCGCTGGGAA CAGGGAACCG AGGACCACTG GCAGGCCGTC CTCTGGCGCG CCCTGGCGGG GGAGGGGAGA GGGCTCCACC GGGAGGCGGT GCGTAGCGAA TTCTTCCGGC GCCTGGCCCG GGGAGAGGTG GACACGGCGC TTTTCCCGGA GCGGATCACC GTCTTCGGCA TCTCGTACTT ACCCCAGTTC CACCTGGATG TCTTCCGGCG CATCGCCGAT TTCACCGAGG TGAACCTCTT TGTCATGGGC CCCTGCCGGG AGTACTGGGC CGACATCCTC CCCGAGCGGA TCATCGCCCG GCTCTCTCCG GAGGAGCGGG AGGTGCGGAT CGAGGGGAAC CCCCTCCTGG CCTCCCTGGG GCTCCTGGGG AAGGAGTTTT CCGATACCCT CGTGGAGCTG GGCGCCACGG CCGGCGGCGA CACCGACCTC TACGGCGATG CCCCCGACAC GACCCTCCTC GGCATGGTGC AGAACGACAT CCTCCGCCTG GAGGGGAGCA GCGGCGACCA GCGCCCCGTG GACGCGGCGG ACCGCTCCAT CCTGATTTCA TCCTGCCACA GCCCCATGCG TGAGGTGGAG GTGCTCCACG ACACCCTCCT GAACCTCTTT GCCTCCGCGG ACGATCTCAC CCCCCGCGAT ATCCTCGTCA TGACGCCGGA CATCGAGACC TACGCCCCCT ATATCTCCGC CGTGTTCGAC GGGTGCCGGG ACCCGCGGCT GAAGATTCCC TACTCCATCG CCGACCGGAG CATCCGGAGG GAAGGGGGGC TTGCGGAGAC GTTCCTGGCA ATCCTCGACC TTTCCGGCAA GCGGTTCCCG GTGACCGCGG TCACGGAGAT CCTGGCCTCC TCCCCGGTTC ACGGCCGGTT CGGCCTCGAT GCCGGCCATC TGGAACTGAT CCGCACCTGG CTGGAGGAGA CCCGCATCCG GTGGGGAATG GACGGTGAGG AGCGGCGCCG TGCCGGGTTT CCCCCCTACC GGGAACACAG CTGGCGGGCC GGGCTGGACC GGCTCATCCT GGGATATGCC ATGCCAGAGG AGGATGGCCG GATGGTGGAG GGGATTCTCC CCTTCGACGC CATGGAAGGG GAGGGACCGG CGGTCCTGGG ACGGTTTGCG GGCTTCGTGG AAGGGCTCCA CGCCTTGGTG GACGAACTGG ACCGCCCCCG CACCCTGACG GAGTGGGTGC GGCTCTGCCG GCGGATTCTC GACGACTTTT TCGCCCCTGG GGAGGAGGGG GCTTTTGACC TGGCCACCCT GAACGGCATT CTCACCGAGT TGGAGACGGT GCGGGACGAG GCGGGATTCG GCGGCGCGGT GGCGCTGCCG GTGATCCGCG CCTGGCTCCG GGGACGGCTC GACCGGGAGG TGCGGGGGCT CGGCTTCATG ACCGGCGGGG TCACCTTCTG CGCCATGCTT CCCATGCGGA GCATCCCCTT CAAGGTCATC GCGCTCCTTG GCATGAGCGA CGGTGCTTTC CCCCGCCGGA ACACCCCCCC CGGCTTCGAC CTCATAGCCC GGGACCGGCG GCGGGGAGAC CGCTCCCTGC GGGACGAGGA CCGTTACCTC TTCCTGGAGG CCCTTCTGTC GGCCCGGCGG CATTTTATCA TCAGCTACAC GGGGCAGAGC ATCCGGGACA ACAGCACGCT TCCTCCATCG GTCCTCGTGG ACGAGTTTCT CGACTACCTG GGGCGCCGCT TCTCGGACGG CACTCCGGAC TTCCCGAAAA AACTCGTGAG CAAGCACCGG CTTCAACCCT TCAGCCCGAC CTACTTCACC GGCGACGGCA CGCTTTTCAG CTACTCGGAG GAGAACTGCC GGGCCGTGGC CCAACGCCTG AAGGGTGCCG TGGCGGTACC TACCTTCATC ACCGAGCCCC TGCCGGAGCC TCCGGATGAA CTGCTGACGG TCTCCCTTTC AGCTCTCCTT TACTTCTTCG ATAACCCGGC CCGCTACTTC GTGCGGACCC GGCTCGGCAT CCGGCTCGAC GAGCTTCCGC CTCCCCTGGA AGACCGGGAG CCCTTTGCCA TTGATTCCCT CGACGCCTAC CGGCTCAGGG AAGAGATGCT GGACCTGGCC CTGGCGGGAC GGGAACCGCG GGAAACCTTT GCCGTGGCCC GGGCCCGGGG GATACTGCCG CCGGCCCGCC AGGGGGAGCT CCTGTTCCGG GGGCTTGGCG ACGGAGTTGA GGATCTGGCT GCACAGATCA GGGCGCTGAC CGGTGGAAGG TCGCCGCTGG ATCCTCTCCC CGTTGACCTT GCCCTGGGGC CTTACCGGAT CACCGGGATG TTGGGGGATA TCTGGCCCGT GGCGCTTCTG CGCCATAAGG GGGCGAAATG TTCGGGGCGC GATCAGGTAC GGCTCTGGAT CGAGCATCTG CTGCTGAATC TTCTCGCCCA GGAGGGGTAT CCGGCCGCAA GCATCCTTGT TGCAACCGAT GTTTCCCTGC GGTTTGAGCC GGTGCCGAAT CCCATGGTGC ACCTGGAGAC CCTTCTCGGC CTCTACGGGC AGGGGCTCCG GGAGCCGCTC CGGTTCTTCC CCCGCACGGC GGCGGCCTAT GCGGTAAAGG GAGAGCTTTC CGCTGCCCGC AACGCTTGGG GAGGGGAGTT CTTCCCCGAG GGGGACGACC CCTACTACCG CCTCTGCTTC GGCGGCATCG ACCCCCTCGA CGGGGAATTC GAGCGGATCG CCCGGGCGGT ATTCGGCCCC CTGAACGAGC ATCGGCAGGG CAAGGGGGAG TAA
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Protein sequence | MPLFLYSSNR MEHLVDRLVE VLRRPLAAPL APEVIVVQSK GMQRWLSMEL ATATGVWANG AYPFPNAFVW DLFRKALPDL PAASPFDPAV LSWRIMGLLS GFLDQPAFAP LAGYLAGEER ELKLYQLAGK IADTFDQYTI FRPDMIARWE QGTEDHWQAV LWRALAGEGR GLHREAVRSE FFRRLARGEV DTALFPERIT VFGISYLPQF HLDVFRRIAD FTEVNLFVMG PCREYWADIL PERIIARLSP EEREVRIEGN PLLASLGLLG KEFSDTLVEL GATAGGDTDL YGDAPDTTLL GMVQNDILRL EGSSGDQRPV DAADRSILIS SCHSPMREVE VLHDTLLNLF ASADDLTPRD ILVMTPDIET YAPYISAVFD GCRDPRLKIP YSIADRSIRR EGGLAETFLA ILDLSGKRFP VTAVTEILAS SPVHGRFGLD AGHLELIRTW LEETRIRWGM DGEERRRAGF PPYREHSWRA GLDRLILGYA MPEEDGRMVE GILPFDAMEG EGPAVLGRFA GFVEGLHALV DELDRPRTLT EWVRLCRRIL DDFFAPGEEG AFDLATLNGI LTELETVRDE AGFGGAVALP VIRAWLRGRL DREVRGLGFM TGGVTFCAML PMRSIPFKVI ALLGMSDGAF PRRNTPPGFD LIARDRRRGD RSLRDEDRYL FLEALLSARR HFIISYTGQS IRDNSTLPPS VLVDEFLDYL GRRFSDGTPD FPKKLVSKHR LQPFSPTYFT GDGTLFSYSE ENCRAVAQRL KGAVAVPTFI TEPLPEPPDE LLTVSLSALL YFFDNPARYF VRTRLGIRLD ELPPPLEDRE PFAIDSLDAY RLREEMLDLA LAGREPRETF AVARARGILP PARQGELLFR GLGDGVEDLA AQIRALTGGR SPLDPLPVDL ALGPYRITGM LGDIWPVALL RHKGAKCSGR DQVRLWIEHL LLNLLAQEGY PAASILVATD VSLRFEPVPN PMVHLETLLG LYGQGLREPL RFFPRTAAAY AVKGELSAAR NAWGGEFFPE GDDPYYRLCF GGIDPLDGEF ERIARAVFGP LNEHRQGKGE
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