Gene Gmet_1889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_1889 
Symbol 
ID3739165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp2103196 
End bp2104068 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content59% 
IMG OID637779180 
Productdihydropteroate synthase 
Protein accessionYP_384843 
Protein GI78223096 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0294] Dihydropteroate synthase and related enzymes 
TIGRFAM ID[TIGR01496] dihydropteroate synthase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0000220218 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.00000000634632 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGAAAAT CCGATGAAAT CGTGGTTCCG TCTTTCTGGA GGCTAGCGAA GCGGTCTCTT 
GACCTCTCCC GGCGTCCCTG CATCATGGGG ATCCTGAACG TAACCCCTGA CTCCTTTTCC
GACGGCAGCC GCTACCTTGA TCTTGACCGT GCGGAAGAGC GCGCTCACCA AATGGTTGAA
CAGGGGGCGG ACATCGTCGA TATCGGGGGG GAGAGCACCC GCCCCAATAT TGCACCGGTG
GATGCCGATG AGGAACTTCG GCGGGTCATT CCTCTGGTCG AACGGCTTGC AGGACGCATT
CCGGTGCCGA TTTCGGTGGA TACCTACAAG GCTGTTGTGG CTCGTGAGGC GCTCCGCGTC
GGCGCCGAAA TCGTGAACGA CATAAGCGGC CTTACCTTTG ACCCGGCCAT GGCTGCCACA
GTGGCGGAAG CCGATGCCGG GCTGGTGGTG ATGCATACCC GCGGCAGACC CGACACCATG
CAAAGGGATA CCGCTTATGG CAACCTGATC GCCGAGGTGA TTGATTTCCT TCGTCAGTCC
GTGTTGATTG CGGAAGCCGC TGGAGTTTCC AAGGAACGGA TTGTTGTTGA TCCGGGAATT
GGCTTCGCCA AGAGCGTTCA GGGCAACCTC GAGATACTGA GGCAACTTCG GGATGTTGCC
AGTCTCCAAC TCCCCATACT TGTGGGAACC TCTCGCAAGT CGTTTATCGG TACCATTCTC
GGCCGCAACG TGGATGAACG CCTGTTCGGC ACAGCGGCAA CGGTGGCCCT TGCAGTCGCC
AACGGTGCCT CCATCATTCG GGTCCACGAA GTACGTGAGA TGCGCGACGT GGCGGATATG
GCCCATGCCG TGCTTCACCC CCACGCGTAT TGA
 
Protein sequence
MGKSDEIVVP SFWRLAKRSL DLSRRPCIMG ILNVTPDSFS DGSRYLDLDR AEERAHQMVE 
QGADIVDIGG ESTRPNIAPV DADEELRRVI PLVERLAGRI PVPISVDTYK AVVAREALRV
GAEIVNDISG LTFDPAMAAT VAEADAGLVV MHTRGRPDTM QRDTAYGNLI AEVIDFLRQS
VLIAEAAGVS KERIVVDPGI GFAKSVQGNL EILRQLRDVA SLQLPILVGT SRKSFIGTIL
GRNVDERLFG TAATVALAVA NGASIIRVHE VREMRDVADM AHAVLHPHAY