Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_1883 |
Symbol | |
ID | 3739159 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 2097946 |
End bp | 2099490 |
Gene Length | 1545 bp |
Protein Length | 514 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637779174 |
Product | hypothetical protein |
Protein accession | YP_384837 |
Protein GI | 78223090 |
COG category | [G] Carbohydrate transport and metabolism [S] Function unknown |
COG ID | [COG0062] Uncharacterized conserved protein [COG0063] Predicted sugar kinase |
TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related [TIGR00197] yjeF N-terminal region |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.00817146 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.000000287535 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAGGTTG TTACCGGCGA AACCATGCAG CGGATGGACC GTCGCTCCAT CGAGGAATTC GGCATACCGG GCATTGACCT CATGGAAAAT GCCGGCCAGG GGTGCGCTGC GGCCATTATT GAACGATTCG GACCGGCTGC GGGACGGATG GTGCTCGTTG TTGCCGGCAA GGGGAACAAC GGTGGCGACG GATATGTAAT TGCCAGGCTT CTGCAGCAGG AAGGGTGGGA AGTTCAGACC GTCGTCCTTG CCCTGCGCGA AGAGATTGCC GGTGATGCCA AGGTTAACCT GGATCGCCTT GATCCAGAAA CCGTCATGTT TTCGCCTCCT CCGGCAGGGC TCGCTCCTTT TGCCCCCCAC CTGGAACGGG CATCGGTGAT CGTAGACGCC CTCTTCGGCA CGGGTCTCAA GAGTGAGGTT CAGGGTAGCT TTGCCGAGGC GATTAACCTT CTGAACGCTG CGGGAAAACC GGTCGTGGCC GTTGATATTC CCTCGGGGAT AGACGCAGGG ACCGGTCGGA CTCTCGGCGT CGCGGTCAAG GCTGATGTAA CCGTTACCTT TGCCCTTGCC AAGCTTGGCC ATGTCCTTTA TCCCGGTGCC GAGCTCTGTG GCGATCTCCG TGTAGTTGAT ATCGGCATCC CTCTTCAGGT TGCCGCTGAT GCCGAAGGGT ACGATTTTGT CGACCATGGG ACGGCTTGTC GTCTGGTTCG TCCTCGGGAT CGTCGCGCCC ATAAGGGGAG CTTCGGCCAT TGTCTTGTTG TTGCCGGCTC CACCGGCAAA ACCGGTGCCG CTGCCATGGC TGCAAACAGT GCGGTTCGTG CCGGCTCGGG ACTGGTGACT TTGGCGGTTC CCGAACGCCT CAACGCCATT CTGGAAATGA AAACCACCGA GGCCATGACC CTGCCACTTC CCGATGGCGG TGCCGGACGC TTGGTGCAGG ATTCTGCGCC GGCACTGCTC GAAGCCATTG GCGGCAAATC AGCCGTCGCG TTGGGGCCGG GCATCTCGTG GCATTTAGAC ACTGCACGCC TTATCCGCCA TCTCGTCACC AAGATCGAGA CCCCTCTTGT GATAGATGCC GATGGTCTGA ACGCCCTGTC CGAAGACCCC GCCATCTTGC AGCGAAAACG GAGCAACTGC ATCGTCCTTA CCCCGCATCC GGGCGAAATG GCCCGTCTTA CCGGCACCTC CACCGCGATT ATCGAGGCAG ACCGGATTGC TGCGGCGCGT GAGTTTGCAG AACAGAATGG CGTGTATATG ATACTGAAAG GTGCCCGTAC GGTCATTGCT GCGCCGGACG GACGGGTCGC CATCAACGGG AGCGGTAACC CTGGTATGGC GTCGGGGGGG ATGGGTGACG TCCTTACCGG CATCCTGGCA TCTCTCTTGG GGCAGGGATA CGAACCCTTT GACGCCTGCC GGCTCGGCGT GTTCATTCAT GGTCACGCCG CAGATTTGGT GGCAGCCGAC AAGGGAGAAA TCGGCATGTC GGCCGTCGAC GTTCAGGAAA GACTCCCCTG GGCATTCAAA ACGCTAACCC TATAA
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Protein sequence | MKVVTGETMQ RMDRRSIEEF GIPGIDLMEN AGQGCAAAII ERFGPAAGRM VLVVAGKGNN GGDGYVIARL LQQEGWEVQT VVLALREEIA GDAKVNLDRL DPETVMFSPP PAGLAPFAPH LERASVIVDA LFGTGLKSEV QGSFAEAINL LNAAGKPVVA VDIPSGIDAG TGRTLGVAVK ADVTVTFALA KLGHVLYPGA ELCGDLRVVD IGIPLQVAAD AEGYDFVDHG TACRLVRPRD RRAHKGSFGH CLVVAGSTGK TGAAAMAANS AVRAGSGLVT LAVPERLNAI LEMKTTEAMT LPLPDGGAGR LVQDSAPALL EAIGGKSAVA LGPGISWHLD TARLIRHLVT KIETPLVIDA DGLNALSEDP AILQRKRSNC IVLTPHPGEM ARLTGTSTAI IEADRIAAAR EFAEQNGVYM ILKGARTVIA APDGRVAING SGNPGMASGG MGDVLTGILA SLLGQGYEPF DACRLGVFIH GHAADLVAAD KGEIGMSAVD VQERLPWAFK TLTL
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