Gene Gmet_1883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_1883 
Symbol 
ID3739159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp2097946 
End bp2099490 
Gene Length1545 bp 
Protein Length514 aa 
Translation table11 
GC content60% 
IMG OID637779174 
Producthypothetical protein 
Protein accessionYP_384837 
Protein GI78223090 
COG category[G] Carbohydrate transport and metabolism
[S] Function unknown 
COG ID[COG0062] Uncharacterized conserved protein
[COG0063] Predicted sugar kinase 
TIGRFAM ID[TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.00817146 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.000000287535 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGGTTG TTACCGGCGA AACCATGCAG CGGATGGACC GTCGCTCCAT CGAGGAATTC 
GGCATACCGG GCATTGACCT CATGGAAAAT GCCGGCCAGG GGTGCGCTGC GGCCATTATT
GAACGATTCG GACCGGCTGC GGGACGGATG GTGCTCGTTG TTGCCGGCAA GGGGAACAAC
GGTGGCGACG GATATGTAAT TGCCAGGCTT CTGCAGCAGG AAGGGTGGGA AGTTCAGACC
GTCGTCCTTG CCCTGCGCGA AGAGATTGCC GGTGATGCCA AGGTTAACCT GGATCGCCTT
GATCCAGAAA CCGTCATGTT TTCGCCTCCT CCGGCAGGGC TCGCTCCTTT TGCCCCCCAC
CTGGAACGGG CATCGGTGAT CGTAGACGCC CTCTTCGGCA CGGGTCTCAA GAGTGAGGTT
CAGGGTAGCT TTGCCGAGGC GATTAACCTT CTGAACGCTG CGGGAAAACC GGTCGTGGCC
GTTGATATTC CCTCGGGGAT AGACGCAGGG ACCGGTCGGA CTCTCGGCGT CGCGGTCAAG
GCTGATGTAA CCGTTACCTT TGCCCTTGCC AAGCTTGGCC ATGTCCTTTA TCCCGGTGCC
GAGCTCTGTG GCGATCTCCG TGTAGTTGAT ATCGGCATCC CTCTTCAGGT TGCCGCTGAT
GCCGAAGGGT ACGATTTTGT CGACCATGGG ACGGCTTGTC GTCTGGTTCG TCCTCGGGAT
CGTCGCGCCC ATAAGGGGAG CTTCGGCCAT TGTCTTGTTG TTGCCGGCTC CACCGGCAAA
ACCGGTGCCG CTGCCATGGC TGCAAACAGT GCGGTTCGTG CCGGCTCGGG ACTGGTGACT
TTGGCGGTTC CCGAACGCCT CAACGCCATT CTGGAAATGA AAACCACCGA GGCCATGACC
CTGCCACTTC CCGATGGCGG TGCCGGACGC TTGGTGCAGG ATTCTGCGCC GGCACTGCTC
GAAGCCATTG GCGGCAAATC AGCCGTCGCG TTGGGGCCGG GCATCTCGTG GCATTTAGAC
ACTGCACGCC TTATCCGCCA TCTCGTCACC AAGATCGAGA CCCCTCTTGT GATAGATGCC
GATGGTCTGA ACGCCCTGTC CGAAGACCCC GCCATCTTGC AGCGAAAACG GAGCAACTGC
ATCGTCCTTA CCCCGCATCC GGGCGAAATG GCCCGTCTTA CCGGCACCTC CACCGCGATT
ATCGAGGCAG ACCGGATTGC TGCGGCGCGT GAGTTTGCAG AACAGAATGG CGTGTATATG
ATACTGAAAG GTGCCCGTAC GGTCATTGCT GCGCCGGACG GACGGGTCGC CATCAACGGG
AGCGGTAACC CTGGTATGGC GTCGGGGGGG ATGGGTGACG TCCTTACCGG CATCCTGGCA
TCTCTCTTGG GGCAGGGATA CGAACCCTTT GACGCCTGCC GGCTCGGCGT GTTCATTCAT
GGTCACGCCG CAGATTTGGT GGCAGCCGAC AAGGGAGAAA TCGGCATGTC GGCCGTCGAC
GTTCAGGAAA GACTCCCCTG GGCATTCAAA ACGCTAACCC TATAA
 
Protein sequence
MKVVTGETMQ RMDRRSIEEF GIPGIDLMEN AGQGCAAAII ERFGPAAGRM VLVVAGKGNN 
GGDGYVIARL LQQEGWEVQT VVLALREEIA GDAKVNLDRL DPETVMFSPP PAGLAPFAPH
LERASVIVDA LFGTGLKSEV QGSFAEAINL LNAAGKPVVA VDIPSGIDAG TGRTLGVAVK
ADVTVTFALA KLGHVLYPGA ELCGDLRVVD IGIPLQVAAD AEGYDFVDHG TACRLVRPRD
RRAHKGSFGH CLVVAGSTGK TGAAAMAANS AVRAGSGLVT LAVPERLNAI LEMKTTEAMT
LPLPDGGAGR LVQDSAPALL EAIGGKSAVA LGPGISWHLD TARLIRHLVT KIETPLVIDA
DGLNALSEDP AILQRKRSNC IVLTPHPGEM ARLTGTSTAI IEADRIAAAR EFAEQNGVYM
ILKGARTVIA APDGRVAING SGNPGMASGG MGDVLTGILA SLLGQGYEPF DACRLGVFIH
GHAADLVAAD KGEIGMSAVD VQERLPWAFK TLTL