| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1879 |
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| Symbol | |
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| ID | 3740281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 2094020 |
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| End bp | 2095606 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637779170 |
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| Product | putative alpha-isopropylmalate/homocitrate synthase family transferase |
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| Protein accession | YP_384833 |
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| Protein GI | 78223086 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00977] 2-isopropylmalate synthase/homocitrate synthase family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0189778 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.000402835 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTCTCG TTAAACTGTA CGATACCACC CTTCGTGACG GCACCCAGGC AGAGGACATA
TCGTTCCTCG TTGAAGACAA GATCCGTATC GCCAATAGGC TTGACGAGAT CGGAATCCAT
TACATTGAAG GGGGGTGGCC CGGCAGCAAC CCCAAGGATG TCGCCTTCTT CAAAGACATC
AAGAAGGAGA AGCTCTCCCA GGCGAAGATC GCCGCTTTTG GTTCGACCCG CCGCGCCAAG
ATAACCCCTG ACAAAGACCA CAACCTGAAG ACCCTCGTGC AGGCCGAGCC CGATGTCTGC
ACCATTTTCG GCAAAACCTG GGATTTTCAT GTTCGGGAAG CATTGCGCAT TTCCAACGAG
GAGAATCTCG AGCTGATCTT CGATTCTCTT GAATATCTGA AGACCCGGGT TCCCGAGGTT
TTCTACGACG CAGAGCACTT CTTTGACGGC TACAAGGCCA ATCCCGACTA TGCCATCAAA
ACCCTCAAGG CTGCTCAGGA TGCCAAGGCC GACTGCATTG TGCTTTGTGA CACCAACGGC
GGTACTATGC CGTTCGAGCT TGCCGAGATT ATCCGCGAGG TTCGCAAGCA CATCTCAGCT
CCCTTGGGCA TTCACACACA CAATGACTCC GAGTGTGCGG TCGCTAACTC TCTTCATGCG
GTCAATGAGG GGATTGTGCA GGTTCAGGGC ACCATCAACG GTTTTGGTGA GCGGTGCGGT
AATGCCAATC TCTGCTCCAT CATGCCTGCC CTCAGGCTCA AGATGAAGGC GGAGTGCGTG
AGTGATGAGC AATTGAAGAA ACTTCGGGAT CTCTCCCGTT TTGTGTACGA ACTGGCGAAC
CTTTCCCCTG ACAAGCATCA GCCTTATGTG GGTAATTCAG CCTTTGCCCA CAAGGGCGGG
GTCCACGTGA GCGCCATTCA GCGCCATCCC GAGACCTATG AGCACATGAG GCCTGAACTG
GTCGGCAACA TGACCCGGGT GCTCATTTCC GACCTCTCCG GCCGCTCCAA TATCCTTGCC
AAGGCCGAGG AATTCAATAT CAACATGGAC AGCAAGGATC CGGTTACCCT TGAAATCCTC
GATAATATCA AAGAGATGGA GAATCGGGGG TACCAGTTTG AGGGGGCCGA GGCTTCATTT
GAATTGCTGA TGAAGCGTGC TCTCGGTACT CATCGGAAGT TTTTCTCGGT TATCGGTTTC
CGGGTTATTG ATGAGAAACG CCACGAAGAC CAGAAGCCTT TTTCCGAGGC GACTATCATG
GTCAAGGTTG GCGGCAAGGT GGAGCACACT GCGGCTGAAG GCAACGGTCC AGTCAACGCT
CTCGACAATG CCCTTCGCAA GGCCCTGGAG AAGTTCTATC CGAAACTGAA GGAAGTGAAG
CTTCTTGACT ACAAGGTTCG CGTCCTGCCG GCAGGGCAGG GTACAGCCTC ATCCATTCGC
GTTCTCATCG AGTCGGGCGA CAAGGAAGCG CGGTGGGGGA CGGTTGGTGT CTCGGAAAAC
ATCATCGATG CCTCCTATCA GGCTCTGATC GACAGTATTG AGTACAAACT CCACAGGACA
GAGGATGCGG AGGGCGTCAA TAAATGA
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| Protein sequence | MSLVKLYDTT LRDGTQAEDI SFLVEDKIRI ANRLDEIGIH YIEGGWPGSN PKDVAFFKDI
KKEKLSQAKI AAFGSTRRAK ITPDKDHNLK TLVQAEPDVC TIFGKTWDFH VREALRISNE
ENLELIFDSL EYLKTRVPEV FYDAEHFFDG YKANPDYAIK TLKAAQDAKA DCIVLCDTNG
GTMPFELAEI IREVRKHISA PLGIHTHNDS ECAVANSLHA VNEGIVQVQG TINGFGERCG
NANLCSIMPA LRLKMKAECV SDEQLKKLRD LSRFVYELAN LSPDKHQPYV GNSAFAHKGG
VHVSAIQRHP ETYEHMRPEL VGNMTRVLIS DLSGRSNILA KAEEFNINMD SKDPVTLEIL
DNIKEMENRG YQFEGAEASF ELLMKRALGT HRKFFSVIGF RVIDEKRHED QKPFSEATIM
VKVGGKVEHT AAEGNGPVNA LDNALRKALE KFYPKLKEVK LLDYKVRVLP AGQGTASSIR
VLIESGDKEA RWGTVGVSEN IIDASYQALI DSIEYKLHRT EDAEGVNK
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