| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1853 |
|---|
| Symbol | |
|---|
| ID | 3741530 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | - |
|---|
| Start bp | 2066018 |
|---|
| End bp | 2067349 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637779137 |
|---|
| Product | peptidase S41A, C-terminal protease |
|---|
| Protein accession | YP_384807 |
|---|
| Protein GI | 78223060 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0793] Periplasmic protease |
|---|
| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00000457328 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 0.829779 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGGAA CCAGGAAGGG TAAAAAAATT GCGCTGTTGG CGGTAGTGCT CTTTGCGATG
CTTGCGGGAG GAGGCTTTGT TGCCCAGAAA CACTGTGCGG CACAGGGCGG AAACGATTAT
GAGTCCATCG AATTATTTAC CGATGTCCTC GCCATCGTAA AAAAGAGTTA CGTCGAAGAG
GTCGATACCA AGAAACTCAT CTATGGGGCC ATCAACGGTA TGTTGGCATC TTTAGATCCC
CATAGCTCCT TTATGCCTCC TGATATGTAC AAGGAAATGA AGATAGACAC CAAGGGATCC
TTTGGGGGAC TCGGCATAGA GATAACCATC AAGGATGGTA TCCTGACGGT TATCTCGCCA
ATTGAGGACA CCCCAGCTTT CCGTGCCGGA ATCAAGGCTG GCGATCAGAT TTTGAAGATT
GATGACCGCT TCACCAAGGA CATGACCATT ATGGATGCCG TAAAGCGAAT GCGCGGCGCG
AAGGGGACCA AGGTCATCCT GACCATCGTG CGGGAGGGAT TTGACAAGCC GAAGGACTTC
ACCCTCGTAC GTGACATCAT TCAGGTTAAG AGTGTCCGTT TCTCGTCTCT CGACAATGGT
TATGGTTACA TCAGAATAGC CCAGTTTCAG GAGAAGACAG ATGATGATTT GGTGAAGGCT
CTTGCGACGC TGAAAGAGGA AAATGGCGGG TCCTTGAAGG GGCTTGTCCT TGACCTTCGC
AACGATCCTG GCGGGCTTCT GGACCAGGCG GTCAAGGTTG CAGACCATTT TGTCGAGCAA
GGACTTATTG TCTATACAGA AGGTCGAGAG AAGGATTCAC GGATGCAGTT CAACGCCCAC
AAGGGAGGAA CGGAACCAGC CTATCCGATG GTTGTGCTCA TTAACGGTGG CAGTGCGAGT
GCTTCTGAGA TCGTTGCCGG TGCCTTGCAG GACCACAAGC GGGCAGTCGT TATGGGGACG
CAGAGTTTTG GCAAGGGTTC GGTGCAGACA ATCATTCCGC TTTCTGATGA TTCGGGACTG
CGTCTTACCA CAGCGCGTTA CTACACGCCG AACGGGCGAT CGATCCAGGC AAAGGGAATA
ACCCCTGACA TCATTGTGGA ACGTGCCGAA ATTCAACCAA CCGAGAAAAA GGATGGCCAT
ATCCGGGAAA AGGATCTGGA AAACCACTTC GAGTCCGGAG AGAAGGTGGA GGGGGAAGAC
AAGAAAACGG AGAAAGGGAA GGTTCCCGCC GCCAAGAGTG ATGATCAGTT GAAAGGAGAT
TACCAAGTGT TGCGCGCGCT TGATCTCCTG AAAGGATGGG AAATCCTTAA GACGATGAAT
AGGGCTAATT AG
|
|---|
| Protein sequence | MFGTRKGKKI ALLAVVLFAM LAGGGFVAQK HCAAQGGNDY ESIELFTDVL AIVKKSYVEE
VDTKKLIYGA INGMLASLDP HSSFMPPDMY KEMKIDTKGS FGGLGIEITI KDGILTVISP
IEDTPAFRAG IKAGDQILKI DDRFTKDMTI MDAVKRMRGA KGTKVILTIV REGFDKPKDF
TLVRDIIQVK SVRFSSLDNG YGYIRIAQFQ EKTDDDLVKA LATLKEENGG SLKGLVLDLR
NDPGGLLDQA VKVADHFVEQ GLIVYTEGRE KDSRMQFNAH KGGTEPAYPM VVLINGGSAS
ASEIVAGALQ DHKRAVVMGT QSFGKGSVQT IIPLSDDSGL RLTTARYYTP NGRSIQAKGI
TPDIIVERAE IQPTEKKDGH IREKDLENHF ESGEKVEGED KKTEKGKVPA AKSDDQLKGD
YQVLRALDLL KGWEILKTMN RAN
|
|---|
| |