| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1839 |
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| Symbol | |
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| ID | 3741516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 2052325 |
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| End bp | 2053248 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637779123 |
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| Product | tRNA synthetase, class II (D, K and N) |
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| Protein accession | YP_384793 |
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| Protein GI | 78223046 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2269] Truncated, possibly inactive, lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00462] lysyl-tRNA synthetase-like protein GenX |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0000593972 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGGCAA ACTGGCGCCT TGCCCGCCGC CATGGAGCGC TCCGGGCACG GGCCCGCATC
ATACAGGAAA TAAGACGCTT TTTTATTGAA GGGGGGTATC TCGAAGTGGA GACCCCCCTT
CGCATTCCTG CTTGTGCGCC CGAGTCCCAC ATTGACCCGG TGCCGGCGGA CGGCTGGTTC
CTCCAGACCT CTCCCGAAAT CTGTATGAAA CGGATGTTGG CGGCGGGTTA CGAGCGGTTA
TTCCAGATCT CCCACTGCTG GCGCGCCGGT GAGCGGGGAA GAATGCATGT CCCGGAGTTC
ACCATGCTTG AGTGGTATCG GGCAGGTACA GACTATCGGG GGGTGATGGA TGAAACCGAG
TTGCTGATAA GGTTCGTGGC TGAAGGGGCG GGATTCGGCG GGCCACTTTC GTTCCGTGGC
AAGGAGATCG ACATTACCGC TGTGTGGGAG CGGATCACCG TGCGTGACGC GTTTGTCAGA
TATGGTGGAA TAACCATGGA TGAGGCCCTT GAAAGGGACA TCTTCGACGA GATGATGGTC
GAACAAATCG AACCGCGTCT CGGCATCGGC CGTCCCACGT TCATCCATGA CTACCCTTCC
TGCCGCAGCG CCCTGGCGCG GCTAAAGAAA GACGATCCAG CCGTTGCAGA GCGATTCGAG
CTTTATCTTG GTGGTGTAGA GATTGCCAAT GCCTTTTCTG AGCTGACCGA CCCAGTGGAG
CAGCGCGCCC GCTTTGAAAG CGAAAACGCC TTCCGTACCT CCCGGGGGCA GACGTCCACT
CCCCTCCCCG AGAAGTTCCT TGCCGAACTG ACTGCCATGC CCCAGGCGGC CGGAATCGCC
CTCGGCATCG ACCGGCTCGT GATGGTGTTG CTTGATGCCG ACACCATTGA CGACGTGGTG
GCGTTTCCCC CTGAGGAACT GTAA
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| Protein sequence | MTANWRLARR HGALRARARI IQEIRRFFIE GGYLEVETPL RIPACAPESH IDPVPADGWF
LQTSPEICMK RMLAAGYERL FQISHCWRAG ERGRMHVPEF TMLEWYRAGT DYRGVMDETE
LLIRFVAEGA GFGGPLSFRG KEIDITAVWE RITVRDAFVR YGGITMDEAL ERDIFDEMMV
EQIEPRLGIG RPTFIHDYPS CRSALARLKK DDPAVAERFE LYLGGVEIAN AFSELTDPVE
QRARFESENA FRTSRGQTST PLPEKFLAEL TAMPQAAGIA LGIDRLVMVL LDADTIDDVV
AFPPEEL
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