Gene Gmet_1838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_1838 
Symbol 
ID3741515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp2051757 
End bp2052320 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content56% 
IMG OID637779122 
Productelongation factor P 
Protein accessionYP_384792 
Protein GI78223045 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) 
TIGRFAM ID[TIGR00038] translation elongation factor P 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000118087 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATACTG TGGCAGATTT AAAAAAAGGA CTGAAAATAA CCCTCGACGG CGATCCCTAT 
CTTGTCACCG CCTTCGAGTT CTCCAAGCCG GGCAAGGGCC AGGCCCTGTA CCGCACCAAG
ATGCGCAACA TGATTACCGG CACTACCCTC GATCGGACCT ACCGTTCCGG CGAGACCTTC
GAACCGGCCC GTCTTGAAGA GCGCCAGATG CAGTACCTCT ACAAGGAAGA CAACCACTAT
ACATTCATGG ACAACCAGAC CTTCGAGCAG GTCCAGATGA GCGAGGACGC CGTAGGCGAT
GCAAAGAACT TCATGATCGA CAACATCCAG GTCGATGTTC TGATGTTTGG GGAAAAGGCC
ATAGGCGTAT CCCTTCCCAA CTTCGTCAAT CTCCGCGTCG TCCAGACCGA CCCGTGGGTC
AAGGGTGACA CCTCCGGCAG TGACTCCAAG CCAGCCACTG TGGAAACCGG CTACGTCCTG
CGCGTACCCC CCTTCATAGA GGAAGGCGAG ATGATTGTGG TCGACACCCG CACCGGTGAT
TACTCCACGA GGGTCAAGGG GTAA
 
Protein sequence
MYTVADLKKG LKITLDGDPY LVTAFEFSKP GKGQALYRTK MRNMITGTTL DRTYRSGETF 
EPARLEERQM QYLYKEDNHY TFMDNQTFEQ VQMSEDAVGD AKNFMIDNIQ VDVLMFGEKA
IGVSLPNFVN LRVVQTDPWV KGDTSGSDSK PATVETGYVL RVPPFIEEGE MIVVDTRTGD
YSTRVKG