Gene Gmet_1819 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_1819 
Symbol 
ID3741496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp2033329 
End bp2034072 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content58% 
IMG OID637779103 
ProductABC transporter-related protein 
Protein accessionYP_384773 
Protein GI78223026 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones64 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones76 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAAAA TCAAGAACAT CAACACCTTC TACGGCAAGG TTCACGCCCT CAAAAACATC 
TCGATTCACC TGAAGCAGGG AGAGATTGTC ACGCTGATCG GCGCCAACGG CGCGGGCAAG
ACGACAATCC TCAATTCCAT CTCCGCCGTG ACACCACCGG CCACCGGGCA GATTCATTTT
GACGACCAAG ATATTGCTGG CCTCGGACCC GACAGGATCG TGAAGCTTGG CATCTGCCAG
GTTCCCGAAG GGAGGCAGGT CTTTAAACCC CTCTCCGTGG AGGACAATCT GGACCTGGGA
GCCTATCTCC GCTACCGGGG GAGGGAAGGG CGGAGCGCCA TCCGCAAGGA CCTGGACGAC
ATGTATGCCC TCTTTCCCCG GCTCCACGAG CGGCGCAAGC AGGCTGCCGG AACTCTTTCC
GGCGGCGAGC AGCAGATGCT GGCCATGGGG AGGGCACTCA TGGCGCGGCC CAAACTCCTC
CTGCTCGATG AGCCTTCAAT GGGACTTGCT CCCCTTGTGG TTCAGGAGAT TTTTCGGGTC
ATCGAGCAGC TCCGAAGCGA GCGGGGGACC ACCGTGCTCC TCGTGGAGCA GAACGCCAAG
GCGGCCCTCA AGATGGCAGA CCGGGGGTAT GTGCTTGAAA CAGGTAAAGT AGTGCTTGAA
GGAATTGCCT CTGAGTTGTT GGAAAACAAG GAGGTTCAGA GGGCTTACCT CGGGAAAGAC
AAGAAGGAAA TCTGGGAAAG ATAG
 
Protein sequence
MLKIKNINTF YGKVHALKNI SIHLKQGEIV TLIGANGAGK TTILNSISAV TPPATGQIHF 
DDQDIAGLGP DRIVKLGICQ VPEGRQVFKP LSVEDNLDLG AYLRYRGREG RSAIRKDLDD
MYALFPRLHE RRKQAAGTLS GGEQQMLAMG RALMARPKLL LLDEPSMGLA PLVVQEIFRV
IEQLRSERGT TVLLVEQNAK AALKMADRGY VLETGKVVLE GIASELLENK EVQRAYLGKD
KKEIWER