Gene Gmet_1788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_1788 
Symbol 
ID3741465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp2003257 
End bp2004051 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content58% 
IMG OID637779074 
Producttransposase/IS protein 
Protein accessionYP_384744 
Protein GI78222997 
COG category[L] Replication, recombination and repair 
COG ID[COG1484] DNA replication protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones74 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACA TCCAGCACCA GCGTATGGTC ACCCTCTGCG ACGACTTGAA GTTTCTGGCG 
GTGACCGATG TGTACGCCGA CCTTGCCGAT GCTGCGGCAA AGCAGGAGTC GTCATACATC
GACTATCTCG AGCAGGTACT CAAGGCCGAG AACGACGTCC GGCAGGGGCG CTCGCGCCAC
ACCATGGCAA AGCTCGCGGG CTTTCCCGCG ATCAAGACCC TTGAGGATTA TGACTTCGAT
TTTGCCACCG GCGCCCCGAA GCAGCGAATC CTGGACCTAT CGGCAATGGC GTTTCTGGAG
CGTCGGGAGA ATGTAATCCT GCTCGGTCCC AGCGGTACCG GCAAGACTCA CCTCGCCATT
GCCCTCGGCT ACCGGGCAAC CCAGTGCGGC GTGAAGGTGC GCTTCATTTC CGCTGCGGAC
CTGATGCTGC AACTCGAAAG CGCCCAGCGC CAGGGGCGGT ACAAGGAAGT AATGCGGCGC
AGTGTCCTGG GGCCGAGACT ACTCATCATC GACGAGATTG GATACCTTCC GTTCAGCGAA
ACACAGGCAA ACCTGTTCTT TCAGGTGATC GCCAAAAGGT ACGAAACAGG TTCCGTCATC
CTCACCTCGA ACCTGAGCTT TGGGGAATGG GAACAGGCTT TCGGCGGCAA CACGGCACTC
ACATCAGCAA TGCTCGACCG GTTGCTGCAC CACGCCCATG TCATTCAGAT CAGGGGTGAC
AGCTACCGAT TGAAAGAGAA GCGCCGAGCT GGCATTCTCG GGCAGCAACT GCCGACACCC
CAGATGGATG ATTAA
 
Protein sequence
MSDIQHQRMV TLCDDLKFLA VTDVYADLAD AAAKQESSYI DYLEQVLKAE NDVRQGRSRH 
TMAKLAGFPA IKTLEDYDFD FATGAPKQRI LDLSAMAFLE RRENVILLGP SGTGKTHLAI
ALGYRATQCG VKVRFISAAD LMLQLESAQR QGRYKEVMRR SVLGPRLLII DEIGYLPFSE
TQANLFFQVI AKRYETGSVI LTSNLSFGEW EQAFGGNTAL TSAMLDRLLH HAHVIQIRGD
SYRLKEKRRA GILGQQLPTP QMDD