Gene Gmet_1746 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_1746 
Symbol 
ID3741422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp1963106 
End bp1964080 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content55% 
IMG OID637779031 
Producthypothetical protein 
Protein accessionYP_384702 
Protein GI78222955 
COG category[R] General function prediction only 
COG ID[COG2984] ABC-type uncharacterized transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones59 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.227035 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGCAAC GCACCTTGAT ACTGAAACGA CTCATATATA TTCTGCCGGT GTTGATTTTT 
GCAGTCTGCG CTACACCTGC GTCCGCGGCG AGAAAGTTCG TGGCGGCTGT CCTTACCAGC
GACATGCCGC GGTACAAGGA GGCCTACCGT GCCTTCGTCA AGGGACTTGC CGCCAAGGGA
TACGGAGAAG GTGAGGTGGA ATTTGTGACC CAGACTCCGA ACCCGGACCC CATCTCCTGG
GCCAACAGTG TCAGAAAATT CAGCGCCCTT GACCCTGATA TCCTTGTCAC GTTCGGTGCG
CCTGCCACAA TATCGGCCAC ACAGGAAGTC CTCAGGATGC CGATCGTGTT CGTGGACGTG
TACGGACCGG TGGAAACGGG CATTTCGCGA AGCATGACGA AAGCAGGAGG AAATCTGTGC
GGCGTCAGCT CCAAGGTGCC CATGACCACA CTCATTAAGG CTATGATGGC CATACGTCCC
GTTAAGACCC TTGGTATTCT TTATAACAGC AGGGAGCGCG GTTCTTATGT CCAGATGCAG
GAGATCAAGC GACTGGCCGC CCAGCAAGGA TTTGCGGTGT TAGAGGCGAA CGTGCCGGTT
GCTTCCGGTC TCGACGCGGC ATTAACCCAT GTGCTGTCAA AATCCGATTG CCTCTTTGTC
TCCGAGAGTT CCGTTGTGAA CCGTGGGATG GATAAGGTAA TGCACAAGGC CATGAGAGCT
AAGGTTCCGG TCATTTCTCT CGCACCTGAT GCGGCAGGGA AGGGGGCCTT GGTATCCCTG
GAGGTGAGCC CCACGGAACA GGGACAACTG GCTGCCAACC ACGTGGCCAA GATTCTTTCG
GGGATGAAAC CGGGAGATCT TCCGATTCTT ACGCCCCGCA AAGTCGATCT TGTAATCAAT
CTGGAAAGCG CGAAATCCCT TGACCTTCAG GTTCCGTTCC GTGTATTGAG TCTTGCCACG
AAGGTGATCA AGTGA
 
Protein sequence
MWQRTLILKR LIYILPVLIF AVCATPASAA RKFVAAVLTS DMPRYKEAYR AFVKGLAAKG 
YGEGEVEFVT QTPNPDPISW ANSVRKFSAL DPDILVTFGA PATISATQEV LRMPIVFVDV
YGPVETGISR SMTKAGGNLC GVSSKVPMTT LIKAMMAIRP VKTLGILYNS RERGSYVQMQ
EIKRLAAQQG FAVLEANVPV ASGLDAALTH VLSKSDCLFV SESSVVNRGM DKVMHKAMRA
KVPVISLAPD AAGKGALVSL EVSPTEQGQL AANHVAKILS GMKPGDLPIL TPRKVDLVIN
LESAKSLDLQ VPFRVLSLAT KVIK