| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1701 |
|---|
| Symbol | |
|---|
| ID | 3741377 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 1908780 |
|---|
| End bp | 1910189 |
|---|
| Gene Length | 1410 bp |
|---|
| Protein Length | 469 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637778986 |
|---|
| Product | radical SAM family protein |
|---|
| Protein accession | YP_384657 |
|---|
| Protein GI | 78222910 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1032] Fe-S oxidoreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.00126936 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 72 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATATCC TGCTTCTTCG CCCCCATCCA GGGAGTGATG CCTTTGGCCT CGGCCCCTTC
TTCCGGGTCG AGCCGCTGGG TCTTGAATAC CTGGGGGCCG CCCTGCTTGC TCGGGGGCAC
GCTGTCACCA TCGCCGACCT CCGTTTTCGC CCCGGCGCCT CCACCTGGGT CCGCCGCAGC
CAGCCGCGGT TAGTGGGGAT CACCTGTCTC CATGCCCTGG AATATGACCG GATCATTGCC
ACGGCCCGCG AGGTGCGGCG GGTTTCGCCG GACGCCTTCA TCCTTGTCGG CGGCCATGCC
GCGGCGGCGT TCCCCGATCC GCTCAAAGAC AATGTCATCG ATGCCATCTG CCTGGACGAC
GGCGAGGAGA TCATCACCGC CCTCGCGGAG GCTCTGGAAA CGGGACGGCC TCTGACCGAC
ATCCCGGCCC TGCTGTTCAG GACAGGGGAC GGCTGGGTGG AAACTCCCCC TCTATCCGAT
CAGACCTGCC TCGACCTGGT CCCGCTCCCG GCGCGGCACC TCGTGGACCG GCACCGCAAC
AACTACCACT GTCTCCTCTT TAAGCCGGTC TGGCTCATCG AGACCGCCCG GGGGTGCCCC
CACCGCTGCT CCTTCTGCTC CGTCTGGCAG CTCTATGGCC GGTCGGTGCG CGAGCGGAGC
ATCGCCACGG TGGTGGAGGA CTTCGCCACT GCCGGTGATT CCATCTTCGT GGCCGACGAC
CTCTTCTGGT ACAACCGGGA ACGGAGCATC GAGCTTGCCG AGGCGCTGAA AAAGCGGGGA
GTCCACAAGC GCTGGATCCT CGTTCAGACC CGCACCGACC TCATATGCCG GAGCGCCGAC
ATCATGGCGG CCTGGCGTCC CCTGGCCAAG GACTTCGACA TCTTCCTGGG GCTTGAGGCG
GCCAGTGACA AGGGCCTTTC CGGTCTCGAC AAGGACGCGG GGCTTGCGGA GAGCATCGAA
GGGGTCAGGA TCGCCCGGGA ACTCAAGTAC GGCATCAACG GCAACTTCCT CGTGGGCCAC
GACTGGGGCG AGGAAGAATT CCGCGAACTC TGGGACTTCG TGGCCCAGTA CGGCCTGCAG
CGGGCCGGCT TCACCATCCA TACCCCGCTG CCGGGGACCG ACCACTACCG CGAGATGAAA
CCGCGGATCC CCGACCAGCC CTGGTCCAAC TTCGACATGC ACCATCTCCT CTGGGAGCCG
CGCATCGGCG CGAAGCGGTT CTTCGAGCTT TACGCCGAAA CCTGGCGCCG CTCGATCCTC
AATACCTCCG GCGAGAAGAG TATCGTCGAC TGGATGCGTC AGGTCCGACC GAGCCAGATT
CCGTACATTG CCCGGGTGCT CTGGCGCACC CAGCGGATGA TGAAGCCTGC GGCCTATTTG
AAGGAGTATG AGGCGACGCG GCCAAGGTAG
|
|---|
| Protein sequence | MNILLLRPHP GSDAFGLGPF FRVEPLGLEY LGAALLARGH AVTIADLRFR PGASTWVRRS
QPRLVGITCL HALEYDRIIA TAREVRRVSP DAFILVGGHA AAAFPDPLKD NVIDAICLDD
GEEIITALAE ALETGRPLTD IPALLFRTGD GWVETPPLSD QTCLDLVPLP ARHLVDRHRN
NYHCLLFKPV WLIETARGCP HRCSFCSVWQ LYGRSVRERS IATVVEDFAT AGDSIFVADD
LFWYNRERSI ELAEALKKRG VHKRWILVQT RTDLICRSAD IMAAWRPLAK DFDIFLGLEA
ASDKGLSGLD KDAGLAESIE GVRIARELKY GINGNFLVGH DWGEEEFREL WDFVAQYGLQ
RAGFTIHTPL PGTDHYREMK PRIPDQPWSN FDMHHLLWEP RIGAKRFFEL YAETWRRSIL
NTSGEKSIVD WMRQVRPSQI PYIARVLWRT QRMMKPAAYL KEYEATRPR
|
|---|
| |