| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1685 |
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| Symbol | |
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| ID | 3741361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 1892883 |
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| End bp | 1893704 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637778970 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_384641 |
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| Protein GI | 78222894 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | [TIGR03006] polysaccharide deactylase family protein, PEP-CTERM locus subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.000637976 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAATG CTCTAACCAT TGACGTGGAG GAATGGTTTC ACGTCTGTGG TGTTGCAGGA
TACGGTTACG GAACTCACCC GTCGCACGTC CTGCGGAATG TTGACAGGCT GCTCGAGTGT
TTCGCGGCGG TGGACGTTAC GGCCACCTTC TTCGTACTCG GTTCGGTAGC CGAAGCATTG
CCGTCGCTGG TCCCGGCAAT AGCAGCGGCC GGCCACGAGG TTGCATCGCA CGGTTTCTCC
CATACGCTGA TTACAGCGTT GTCGCCGGCC GCATTTCGCG ACGAATTGCG CCGAACCAAT
GATATTCTCT CGATTCAGTC GGGCAAGCGG CCCATCGGGT TTCGTGCCCC CCAGTGGTCT
CTTTCGCGTA CGGTGACACC GTGGGCATTC GAGATCCTGC ATGATGAGGG ATTCCGCTAC
GATTCCAGTT GCAACCCGCT CCCTTTTGTG GGGGATCGGT CCGGTTCCCG CGTTCCCTAC
AAAATCGGGA TGGCTGGGAA AAGTCTCTGG GAGATTCCCC CGATGGTAAC GCCGTCGATG
CTGGGAAACC TCCCGACCGG CGGGGGATGG GGATTCAGGT TCTTTCCGCC GCGGATGATC
GAGCGGACTG TACAGCGCCT CAATGAAGAG GGACAATCGG CTGTTTTCTA TCTTCATCCC
CGGGAGATTG ACCCCAGTGG TCCGCGTCTT CCATTGTCGC TCTTTCGACA GTTTGTGGCC
TATGGCCCAC GGACTGACGC ATTGCAGCGG CTGGTCCCGC TTATGAAGCG GTTTCGTTTT
ACTTCTCTGG GCAATCTGGT GGATCAGTGG GAATCTGCGT AG
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| Protein sequence | MNNALTIDVE EWFHVCGVAG YGYGTHPSHV LRNVDRLLEC FAAVDVTATF FVLGSVAEAL
PSLVPAIAAA GHEVASHGFS HTLITALSPA AFRDELRRTN DILSIQSGKR PIGFRAPQWS
LSRTVTPWAF EILHDEGFRY DSSCNPLPFV GDRSGSRVPY KIGMAGKSLW EIPPMVTPSM
LGNLPTGGGW GFRFFPPRMI ERTVQRLNEE GQSAVFYLHP REIDPSGPRL PLSLFRQFVA
YGPRTDALQR LVPLMKRFRF TSLGNLVDQW ESA
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