Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_1653 |
Symbol | gpmA |
ID | 3740503 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 1858881 |
End bp | 1859624 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637778938 |
Product | phosphoglyceromutase |
Protein accession | YP_384609 |
Protein GI | 78222862 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0588] Phosphoglycerate mutase 1 |
TIGRFAM ID | [TIGR01258] phosphoglycerate mutase, BPG-dependent, family 1 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.00239487 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 0.883975 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAAAGC TCGTTTTGCT TCGTCACGGC GAAAGCGTCT GGAACAGGGA GAACCGTTTC ACCGGCTGGA CCGATGTGGG GCTCAGCGAG AAGGGGATCG AGGAGGCAAT CAGTGCCGGG CGCACCCTGA AAGAAGAAGG GTTTGTTTTC GACGTGGCCT ACACGTCGGT CCTCAAGCGG GCCATCAAGA CCCTCTGGCT CGTCCTGGAA GAGATGGATC TCATGTGGAT CCCGGAATAC CGCCACTGGA GGCTCAACGA GCGTCACTAC GGAGCGCTCC AGGGGCTCAA CAAGGCGGAG ACCGCCGAAC GGCACGGCAT GGAGCAGGTC ATGATCTGGC GCCGCAGTTA CGATATCCCG CCGCCTCCCC TGACCCCCGA CGATCAGCGG TTTCCGGGAA GCGATCCTCG CTATGCATCA CTTTTACCCG AGGAGTTACC ACTCACCGAA TCCCTCAAGG ACACGGTCGC CCGTTTTCTT CCCTACTGGC ATGAAACCAT CGCCCCCGCC GTAAAAGAAG GGAAACGGGT TCTCGTCACC GCCCACGGCA ACAGCCTGCG GGCCCTTGTA AAATACCTGG ATCTGGTCTC TGACTCCGAA ATCGTCAACC TCAATATTCC CACCGGCATT CCCCTTGTCT ACGAACTAAC GGATAACATG ACACCCATCA GGAGCTACTA TCTCGGTGAT CCGGATGACG TGGCCAGGGC AAGCAGGATG GTGGCGGATC AGATAAAGAA GTAA
|
Protein sequence | MKKLVLLRHG ESVWNRENRF TGWTDVGLSE KGIEEAISAG RTLKEEGFVF DVAYTSVLKR AIKTLWLVLE EMDLMWIPEY RHWRLNERHY GALQGLNKAE TAERHGMEQV MIWRRSYDIP PPPLTPDDQR FPGSDPRYAS LLPEELPLTE SLKDTVARFL PYWHETIAPA VKEGKRVLVT AHGNSLRALV KYLDLVSDSE IVNLNIPTGI PLVYELTDNM TPIRSYYLGD PDDVARASRM VADQIKK
|
| |