| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1651 |
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| Symbol | |
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| ID | 3740501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 1854460 |
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| End bp | 1855683 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637778936 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_384607 |
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| Protein GI | 78222860 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 0.986785 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTAT CTCTCTCGCC CCGCGACCCG TCGAGAAGCG GCATCCTGTC CCGTCGCGTT
CGCCGACTGG TCGTGCAGGG GGCAGCTTAT TCTCTCATTG TCACACTTGC CGCCTGCGCC
AAGAAAGAGC AGAAACCTGC TGCCAAGCCG CCGGTCCCGG TAGCGATCGC CACGGTCGAG
CGAAAGACCG TCCCGGTCCA GATCAAGGCC ATCGGCAACG TGGAGCCCTA CGCTACCGTG
GCCGTCAAGG CTCAGGTGAA CGGCGAGGTG CTGAAGGTCC ATTTCACCGA GGGACAGGAC
GTGAAACGGG GTGACCTCCT TTTCGCCATT GACCCGCGCA CCTATCAGGC AGCAGTGAAG
AAAGCCGAAG CCAATCTTTC CCGTAACCTC GTCCAGGCAC GGAACGCCCG GCAGGACGCG
GAGCGCTACG CCCAACTGGT GAAGGAGGGC ATCGTGACTT CGGAGCAGTA CGAGCAGTAC
CGGACCAGGG CCGAGGCCTT TGCCGCCGAT GTGTCCGCCG ACCGGGCCGC CGTCGAGAAC
GCGAAGGTGG AGCTTTCCTA CTGCTTCATC CGCTCCCCCT TGACCGGCCG CACCGGGAAT
CTGGCGGTCC ATGCGGGGAA CATCGTAAAG GCCAATGAGA ACCCCCCCCT GGTCACCATC
AACCAGATTA CGCCGGTCTA CGTGGCGTTT TCCATCCCCG AAAAGGACCT CGCCGAGGTC
AAGCGCCGCA TGGCTGCAGG AAAGCTGGCG GTGGAGGCGA CCATTCCCAA CGATGCCGGT
CCCGCTGAGC AGGGGATGAT CTCCTTCCTC GACAACACGG TTGACGTGGC CACCGGCACC
ATCAAACTCA AGGGGACCTT CGAGAACAGG GCACGTCGCC TCTGGCCCGG GCAGTTCGCC
AACGTGGTTG TGACCCTCGC GGCCAGGCCC AATGCGATTG TGGTCCCGGC CCAGGCGATT
CAGACCGGCC AGAGCGGTCC CTATGTCTTT GTGGTAAAGG CTGACTCTTC GGTAGAAATC
CGGCCGGTGA CGCCGGGCAT TGCCTACGAA GGGGTCACCA TTATCGAGCA GGGGCTCGCG
CCCGGTGAAA GGGTTGTGAC CGACGGCCAG ATGAGGCTCA CGCCCAAGGC CAGGGTGACG
GAAAAACCGG GACCGGGGAC CAGGGACCAA GGGCCGGCAA ACCCCCGGCA AGCTTCTGGC
CAGCCCAAGG GCCAGCAACC ATGA
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| Protein sequence | MNLSLSPRDP SRSGILSRRV RRLVVQGAAY SLIVTLAACA KKEQKPAAKP PVPVAIATVE
RKTVPVQIKA IGNVEPYATV AVKAQVNGEV LKVHFTEGQD VKRGDLLFAI DPRTYQAAVK
KAEANLSRNL VQARNARQDA ERYAQLVKEG IVTSEQYEQY RTRAEAFAAD VSADRAAVEN
AKVELSYCFI RSPLTGRTGN LAVHAGNIVK ANENPPLVTI NQITPVYVAF SIPEKDLAEV
KRRMAAGKLA VEATIPNDAG PAEQGMISFL DNTVDVATGT IKLKGTFENR ARRLWPGQFA
NVVVTLAARP NAIVVPAQAI QTGQSGPYVF VVKADSSVEI RPVTPGIAYE GVTIIEQGLA
PGERVVTDGQ MRLTPKARVT EKPGPGTRDQ GPANPRQASG QPKGQQP
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