| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1630 |
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| Symbol | |
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| ID | 3740399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 1826798 |
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| End bp | 1827484 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637778914 |
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| Product | haloacid dehalogenase-like hydrolase |
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| Protein accession | YP_384586 |
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| Protein GI | 78222839 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0000000995423 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTATTG ACTGGAATCA GATCGATACG GTGCTCCTCG ACATGGACGG CACCCTCCTG
GACCGCCATT TCGACGATCA TTTCTGGCTC GAGCACGTGC CGAAACGCTA CGCGGCCAAG
AACGGCATCC CCCTCGATAC GGCCAAGAAG TCCCTCTACG CCCAATTCCG CTCCCAGGAG
CGGACCCTCA ACTGGACCGA CCTCGACTAC TGGTCCGACC GGCTCGGGCT CGACATCCCG
CTTCTGAAGC TCGAAGTAGA GCACCTCATC GCCGTCCATC CCGGCGTGGT GGAATTTCTT
CTGTTTCTCC GGCAGCACGC CAAGGAGATC TGGCTGGTGA CCAACGCCCA CGGCAAGACC
CTTGACATCA AGATGCGCAA AACCCGCATC GGGCCCTACT TTACCGGCAT CGTCTCGGCC
CACGAAGTCG GTCTCCCCAA GGAAGACGTG GCTTTCTGGG GAATGCTCAG GAAGACCGTC
CCCTACGACC CGGCCCGTAC CATGCTCGGC GAGGACAGCG AGACGAACCT CGGCACGGCG
GAAGCCTATG GTATCAGCCA CCTCATCTAC GTGAGCCGCT ACAGCTCGAC GGTGCATCCT
CTCCCCTCGG AACGGTTCGC GTCAATCCAC TATTTCAACC AGCTCATCCC CTCGCCCGAC
ACCTCATCGG TAAGCCTCAA CCCATGA
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| Protein sequence | MTIDWNQIDT VLLDMDGTLL DRHFDDHFWL EHVPKRYAAK NGIPLDTAKK SLYAQFRSQE
RTLNWTDLDY WSDRLGLDIP LLKLEVEHLI AVHPGVVEFL LFLRQHAKEI WLVTNAHGKT
LDIKMRKTRI GPYFTGIVSA HEVGLPKEDV AFWGMLRKTV PYDPARTMLG EDSETNLGTA
EAYGISHLIY VSRYSSTVHP LPSERFASIH YFNQLIPSPD TSSVSLNP
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