| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1624 |
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| Symbol | |
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| ID | 3739363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 1821495 |
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| End bp | 1822607 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637778908 |
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| Product | 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase |
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| Protein accession | YP_384580 |
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| Protein GI | 78222833 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase
[COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD
[TIGR01508] 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine 1'-reductase, archaeal |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00000204798 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGTGT CTCCCGAAAA GATCATGAAG CGTGCTCTGG CGCTGGCAAG GCGGGGCAAG
GGCAAAACGT CTCCGAATCC GGCGGTGGGG TGCGTCATCG TGCGGGACGG TGCAATCGTC
GGCGAAGGGT GGCACCGGAA GGCCGGCACC CCCCATGCCG AGGTCCATGC CCTGCGGCAG
GCCGGCGAGC TGGCCCGGGG CGCCGATGTC TACGTGACTC TGGAGCCCTG CTCCCACTTC
GGCAAGACTC CCCCGTGTGC CGATGCGCTG GTCGAGGCAG GGGTGGGGCG CGTGTTCGTC
GGCATGGTGG ACCCGAATCC GAAGGTTTCC GGGCGCGGCA TCGAGCGGCT TCGGGTTGCC
GGCATCGAGG TGGTTACCGG GATACGGGAG GCGGAGTGCC GCCGGCTTAA CGAGCCATTC
GTGAAACACG TGACCACCGG GCTTCCCTTT GTGATCCTCA AGTCGGCCAT GACCATGGAC
GGCAAGACCG CTACCGCTTC GGGCGATTCG CGCTGGATAA CCAACGAAAA ATCAAGGCGC
TACGTTCATA AACTTCGATC AATGGTCGAT GCGATAATGG TCGGTGTCGG CACTGTCTTG
GCCGATGACC CCCAGCTTAC GGCGCGAATC CCGCGGGGGA AGGATCCTGT CCGGGTTGTG
GTGGACAGTT CCCTCAGAAT CCCCTCTGGT GCCCGGATGC TCCACCAGGA GTCCCCGGCA
ACAACCGTCG TTGCCACCGT CTCGGAAGAC CGAAACCGGA TCGTGAAGCT GGAATCTGCA
GGTGCCGAAG TGCTCCGTTG CCATGCCGTC ATGGGGCGCA TTGATCTGCG CGATCTCCTT
GCCCGCCTCG GTGCCCGTGG GGTGCAATCG ATCCTCCTCG AAGGGGGGAG CGAACTGGCC
GGCGAAGCAC TCCGTGCCGG GCTCATCGAC AAATGTGTCC TCTTCTACGC CCCCAAGTTT
TTGGGGGGAG CCGCCGGTCT GGGGCTCTTT GGCGGGCCGT CGGCCGAAAG AATGGATGGA
TGCTGCCGGC TGAAGGATGT AAGCGTGCGG CGTTTCGGCG ATGACGTGAT GATCGAGGCT
TATCCGGAGG ATTTATGTTT ACCGGGCTCA TAG
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| Protein sequence | MDVSPEKIMK RALALARRGK GKTSPNPAVG CVIVRDGAIV GEGWHRKAGT PHAEVHALRQ
AGELARGADV YVTLEPCSHF GKTPPCADAL VEAGVGRVFV GMVDPNPKVS GRGIERLRVA
GIEVVTGIRE AECRRLNEPF VKHVTTGLPF VILKSAMTMD GKTATASGDS RWITNEKSRR
YVHKLRSMVD AIMVGVGTVL ADDPQLTARI PRGKDPVRVV VDSSLRIPSG ARMLHQESPA
TTVVATVSED RNRIVKLESA GAEVLRCHAV MGRIDLRDLL ARLGARGVQS ILLEGGSELA
GEALRAGLID KCVLFYAPKF LGGAAGLGLF GGPSAERMDG CCRLKDVSVR RFGDDVMIEA
YPEDLCLPGS
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