Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_1623 |
Symbol | nrdR |
ID | 3739362 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 1821039 |
End bp | 1821491 |
Gene Length | 453 bp |
Protein Length | 150 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637778907 |
Product | transcriptional regulator NrdR |
Protein accession | YP_384579 |
Protein GI | 78222832 |
COG category | [K] Transcription |
COG ID | [COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains |
TIGRFAM ID | [TIGR00244] transcriptional regulator NrdR |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0000000406382 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAATGCC CCTTTTGCGC CCATCCTGAC AGCAAGGTCG TTGACTCCCG CCCCGACAAG GGTGGGGCTG CTATCCGGCG TCGCCGCGAG TGCGAATCCT GCGCCAAGCG CTTTACGACC CATGAGCGGA TTGAGGAGAC TCTTCCCCTG GTTCTCAAGA AGGACGGCCG CCGGGAGCCC TTCGACCGGA TGAAGATCGT GGGCGGCATC CTGAAGGCGT GTGAGAAGCG CCAGGTGTCG CGGGAGACCG TCGACCGTCT CGTGGACCGG CTCGAAGGAC GGCTCCAGGA GTGGAGCGAG AAGGAAGTAC CCAGTACCAC CATCGGCGAG TGGGTCATGA CCGAACTCCA TGACATCGAC GAGGTGGCCT ATGTCCGTTT TGCCTCCGTC TACCGCTCCT TCAAGGACGT GAACGAGTTC ATGGCCGAAC TGCAGGACCT CCTGAAGAAG TAA
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Protein sequence | MKCPFCAHPD SKVVDSRPDK GGAAIRRRRE CESCAKRFTT HERIEETLPL VLKKDGRREP FDRMKIVGGI LKACEKRQVS RETVDRLVDR LEGRLQEWSE KEVPSTTIGE WVMTELHDID EVAYVRFASV YRSFKDVNEF MAELQDLLKK
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