Gene Gmet_1623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_1623 
SymbolnrdR 
ID3739362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp1821039 
End bp1821491 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content61% 
IMG OID637778907 
Producttranscriptional regulator NrdR 
Protein accessionYP_384579 
Protein GI78222832 
COG category[K] Transcription 
COG ID[COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains 
TIGRFAM ID[TIGR00244] transcriptional regulator NrdR 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0000000406382 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAATGCC CCTTTTGCGC CCATCCTGAC AGCAAGGTCG TTGACTCCCG CCCCGACAAG 
GGTGGGGCTG CTATCCGGCG TCGCCGCGAG TGCGAATCCT GCGCCAAGCG CTTTACGACC
CATGAGCGGA TTGAGGAGAC TCTTCCCCTG GTTCTCAAGA AGGACGGCCG CCGGGAGCCC
TTCGACCGGA TGAAGATCGT GGGCGGCATC CTGAAGGCGT GTGAGAAGCG CCAGGTGTCG
CGGGAGACCG TCGACCGTCT CGTGGACCGG CTCGAAGGAC GGCTCCAGGA GTGGAGCGAG
AAGGAAGTAC CCAGTACCAC CATCGGCGAG TGGGTCATGA CCGAACTCCA TGACATCGAC
GAGGTGGCCT ATGTCCGTTT TGCCTCCGTC TACCGCTCCT TCAAGGACGT GAACGAGTTC
ATGGCCGAAC TGCAGGACCT CCTGAAGAAG TAA
 
Protein sequence
MKCPFCAHPD SKVVDSRPDK GGAAIRRRRE CESCAKRFTT HERIEETLPL VLKKDGRREP 
FDRMKIVGGI LKACEKRQVS RETVDRLVDR LEGRLQEWSE KEVPSTTIGE WVMTELHDID
EVAYVRFASV YRSFKDVNEF MAELQDLLKK