| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1591 |
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| Symbol | |
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| ID | 3741607 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 1792503 |
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| End bp | 1794596 |
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| Gene Length | 2094 bp |
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| Protein Length | 697 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637778876 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_384548 |
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| Protein GI | 78222801 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000274375 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.0293067 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGAAC AGAAGGTAAA CGTAGATTTT GGCGGCAGAA CGATAACCAT AGCTACCGGC
AAAATGGCCA AACAGGCGAG CGGTGCGGTA ATGGTAAGTT GCGGTGAGAC CATGGTGCTC
GTCACCGCCG TGGCGCTCAA ATCCGCCAAG GAGGGACAGG ACTTCTTTCC CTTGACGGTC
AACTACCAGG AAAAGGCCTA TGCCGGCGGC AAGATTCCCG GCGGCTTCTT CAAACGGGAA
GGGCGCCCCA CGGAGAATGA GACCCTTACC TGCCGCTTCA TCGATCGGCC GATTCGTCCT
CTTTTCCCTG AGAACTTTCT CAACGATACC CAGATCATGG CCACCGTCGT TTCCGCGGAT
CAGGACAATG ACCCGGGAAT TCTTGCCATG ATCGGCGCCT CGGCGGCCCT TGAAGTATCT
GATATTCCCT TTTTCGGTCC CATCGCCGGC GTAAAGGTTG GCCGGGTTGA CGGGAAGTTC
ATTTGCAACC CCACTGCCGA GCAACTGGCT GCCAGTGACT TGGAAGTAGT TGTTGCAGCA
AGCCGCGATG CGGTCATTAT GGTTGAGGGT GGTGCTGCGG AGATTTCAGA AGCCGACCTC
CTTGAGGCGA TTTTCTTCGG CCATGCCTCG GTGCAGCCGA TCATCGACGC CCAGATCGAA
CTGCGCAAGC AGGCTGGCGT ACCCAAGCGG GAAATTGCTC CCCCCGCCGT CGATGAGGCT
CTTGGTGCAA AGGTCAAAGA GCTTGCGTAT GCCCAGATGA AAGATGCCGT CCGGATTCGC
TCGAAGCAGG AGCGCCACAA TCGTATCAGT GCCATTGCCG ATGAAACGGT GGCTGCCCTT
GAAGCTGATT TTTCCGGACG CGGCGCCGAG ATTAAAGATT TCCTCGATGG TTTCGAGTAT
GAGCTTGTAC GTGAGCACAT CCTCAAAGAC GGTGAGAGGA TTGACGGCCG CGATACCAAA
ACGATCAGGC CCATCACTTC CGAGGTCGGT ATTCTCCCTC GCGTCCACGG CTCAGCTCTT
TTCACCCGTG GCGAGACCCA GGCCCTTGTT GCCGCCACTC TCGGTACTTC CAGCGACGAA
CAGCGGATCG ACTCACTCTA CGGGGAGAGC AGAAAGAGGT TCATGCTCCA CTATAACTTC
CCTCCCTTCT CTGTGGGGGA GACGAGCTTC CGTCTTGCGC CGGGCCGTCG TGAGATCGGC
CACGGTTACC TGGCTGAGCG CGCTCTTGAG CGGGTTCTGC CCAAGCACGA TGATTTCCCG
TACACCATCC GCATCGTGTC GGACATTCTG GAAAGCAACG GTTCCTCCTC TATGGCTTCG
GTCTGCGGCG GCGCCCTCTC CATGATGGAT GCCGGCGTCC CCATTTCCGC TCCGGTTGCA
GGCATTGCCA TGGGGCTCAT CAAGGAAGGG GACGACATTG CCATCCTTTC CGACATCCTT
GGTGATGAAG ACCACCTTGG CGACATGGAC TTCAAGGTCG CCGGCACCTC GACAGGGGTG
ACCGCAATCC AGATGGACAT TAAGATTACC GGCGTGACCC GTGAGATCAT GGGCAAAGCC
CTTGAGCAGG CAAAAGAAGG GCGGCTCCAT ATCCTCGGTA AAATGGCCGA AGCCCTGGCT
GCTCCGCGTA CCGATCTGTC ACCCTATGCC CCGCGTATCA CGACTATCTG GGTCAAGACC
GACAAGATCC GTGACGTAAT CGGCGCCGGT GGCAAGAACG TCAGGGGGAT CACTGAGGCT
ACCGGCGTTT CCATCGATAT CGAGGATACC GGCAAGATCA ATATCGCCAG CACCAACAAA
GAGGCCTGCG ACAAGGCGAT CAAGATGATC CGCGACCTTA CGGCGGAAGC TGAAGAGGGC
AAGCTTTACA TGGGTACGGT CCGCAAGGTC ATGGACTTTG GCGCTTTTGT CGAAATCTTC
CCGGGTACCG ATGGCCTTGT TCATATCTCC GAACTCGATA CCGAGCGGGT GAAGGACGTT
ACCGACATCC TCAAGGAAGG GGACAAGGTG CTCGTGAAGT GCATCGGCAT TGATAAGCAA
GGAAAGATAA AACTGTCCCG TAAAGAAGCT CTGGGTGCAG TACTGCCCGA GTAG
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| Protein sequence | MNEQKVNVDF GGRTITIATG KMAKQASGAV MVSCGETMVL VTAVALKSAK EGQDFFPLTV
NYQEKAYAGG KIPGGFFKRE GRPTENETLT CRFIDRPIRP LFPENFLNDT QIMATVVSAD
QDNDPGILAM IGASAALEVS DIPFFGPIAG VKVGRVDGKF ICNPTAEQLA ASDLEVVVAA
SRDAVIMVEG GAAEISEADL LEAIFFGHAS VQPIIDAQIE LRKQAGVPKR EIAPPAVDEA
LGAKVKELAY AQMKDAVRIR SKQERHNRIS AIADETVAAL EADFSGRGAE IKDFLDGFEY
ELVREHILKD GERIDGRDTK TIRPITSEVG ILPRVHGSAL FTRGETQALV AATLGTSSDE
QRIDSLYGES RKRFMLHYNF PPFSVGETSF RLAPGRREIG HGYLAERALE RVLPKHDDFP
YTIRIVSDIL ESNGSSSMAS VCGGALSMMD AGVPISAPVA GIAMGLIKEG DDIAILSDIL
GDEDHLGDMD FKVAGTSTGV TAIQMDIKIT GVTREIMGKA LEQAKEGRLH ILGKMAEALA
APRTDLSPYA PRITTIWVKT DKIRDVIGAG GKNVRGITEA TGVSIDIEDT GKINIASTNK
EACDKAIKMI RDLTAEAEEG KLYMGTVRKV MDFGAFVEIF PGTDGLVHIS ELDTERVKDV
TDILKEGDKV LVKCIGIDKQ GKIKLSRKEA LGAVLPE
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