Gene Gmet_1588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_1588 
Symbol 
ID3740569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp1790017 
End bp1790967 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content54% 
IMG OID637778873 
Productphosphoesterase, RecJ-like 
Protein accessionYP_384545 
Protein GI78222798 
COG category[R] General function prediction only 
COG ID[COG0618] Exopolyphosphatase-related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00000485827 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.0878205 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGAGG GTATCATCGA GGAGATCCGC ACTAACGGAA GCTTCCTGAT CACTACCCAT 
GAGAATCCCG ACGGCGATGC CGTCGGGTCG TCGCTGGCCC TTGCTGGATA TCTCCGACGT
TTGGGCAAGG ATGTGACGAT CCATTTCTGT GATCCTGTCC CCGATCTCTA CGCTTTTTTG
CCACTGGCGG AAGAGGTGAC ACGGACCGTT CCTGATCGTG ACTACGACAT CTGTTTTGTC
CTCGATGTGG GCGAGTTCCG TCGGGCTGGC AAACAGATTG CTGAGTGCAA GCGGATCAAG
AAATTCATAA ACATCGACCA TCATTTAACA TCTGATAACT TTGGCTTCAT AAACTATATC
GATCCCAAAG CGGCGGCAAC GGGTATTCTC GTACATCGCA TCATCACGGG GGCAGGGGAC
GTCGTAGGGT ATGAAACGGC TCTCTGTCTC TACACCGCCA TCATTACCGA TACCGGTTCC
TTTCGCTATT CCAACGCGAA TCCCGAGGCC TTTGCTATTG CGGGTGAGTT GGTTTCCACG
GGGATCAACA CGTGGAGCAT TGCCGAGAAA CTCTATGAGA GTCAACCCCG CGAACGGCTT
GAGCTTCTTG CCCTTGCCCT CTCTACCCTG ACAATCTCTC CCCGCGGCGA ATATGCCTCT
ATCACCGTTA CTCTCGACAT GTACAACAAG ACGGGGGCTT CCGCTGAACT GACTGACGGC
TTTGTTAATT ATCCCCGCTC CATCCGCGGG GTGGAAGTTT CGGTCTTTTT CCGCGAGATC
AATCCCGGCC TTTTCAAAGT CGGGTTTCGT TCCAAGGGGA AGATCGACGT GTCCCGTATC
GCGGCGGCCT TTGGCGGCGG CGGGCATCAC AATGCCGCAG GAGCTACGAT GAATGGTTCC
CTTGAAGGGA TAAAGGCAAC GTTGTTCTCC CACCTGGAGA GTACCCTCTG A
 
Protein sequence
MIEGIIEEIR TNGSFLITTH ENPDGDAVGS SLALAGYLRR LGKDVTIHFC DPVPDLYAFL 
PLAEEVTRTV PDRDYDICFV LDVGEFRRAG KQIAECKRIK KFINIDHHLT SDNFGFINYI
DPKAAATGIL VHRIITGAGD VVGYETALCL YTAIITDTGS FRYSNANPEA FAIAGELVST
GINTWSIAEK LYESQPRERL ELLALALSTL TISPRGEYAS ITVTLDMYNK TGASAELTDG
FVNYPRSIRG VEVSVFFREI NPGLFKVGFR SKGKIDVSRI AAAFGGGGHH NAAGATMNGS
LEGIKATLFS HLESTL